Job Description P12996 Confidence 57.06% Date Thu Jan 5 11:33:15 GMT 2012 Rank 292 Aligned Residues 152 % Identity 15% Template d2btma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.											.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	.	.	.	.	.	.	.	.	.	.	A	G	L	L	L	Q
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																						.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																						.	.	.	.
Template Sequence		P	V	M	L	K	D	L	G	V	T	Y	V	I	L	G	H	S	E	R	R	Q	M	F	.	.	.	.	.	A	E	T	D	E	T	V	N	K	K	V	L	A	A	F	T	R	G	L	I	P	.	.	.	.	I	I	C	C	G	E	S	L	E	E	R	E	A	G	Q	T	N	A	V	V	A	S	Q	V	E	K	A
Template Known Secondary structure									T							S								S	.	.	.	.	.																		T				.	.	.	.													T	T
Template Predicted Secondary structure																									.	.	.	.	.																						.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																															.	.	.	.	.	.	.
Query SS confidence																					.	.																															.	.	.	.	.	.	.
Query Sequence		L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	.	.	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	.	.	.	.	.	.	.	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A
Query Conservation																					.	.																															.	.	.	.	.	.	.
Alig confidence																					.	.				.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		L	A	G	L	T	P	E	Q	V	K	Q	A	V	I	A	Y	E	P	I	W	A	I	G	T	.	.	.	.	G	K	S	S	T	P	E	D	A	N	S	V	C	G	H	I	R	S	V	V	S	R	L	F	G	P	E	A	A	E	A	I	R	I	Q	Y	G	G	S	V	K	P	D	N	I	R	D	F	L	A	Q	Q
Template Known Secondary structure			T	T							T	T								G	G	G	T	T	T	.	.	.	.	S																													T	T	S						S	S			T	T	T						T	S	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q	L	F	R	K	L
Query Conservation
Alig confidence										.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		Q	I	D	G	A	L	V	G	.	.	.	.	.	G	A	S	L	E	P	A	S	F	L	Q	L	V	E	A	G
Template Known Secondary structure		T							S	.	.	.	.	.	G	G	G	S	S										T	T
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions