|   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . | |
. | . | . | . | 110 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
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|
| . |
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|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
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|
|
|
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|
|
| . |
. |
. |
. |
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| . |
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| . |
. |
. |
. |
. |
. |
. |
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|
| . |
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|
Query Sequence |   |
E | V | E | Q | V | L | E | S | A | R | K | A | K | A | A | G | S | T | . |
. |
. |
. |
R | F | C | M | G | A | A | W | K | N | P | . |
H | E | R | D | M | . |
. |
. |
. |
. |
. |
. |
P | Y | L | E | Q | M | V | Q | G | V | . |
K | A | M | G | L | E | A | C | M | T | L | G | T | L | S | E | S | Q | A | Q | R | L | A |
Query Conservation |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   | . | . | . | . |   |
|   |
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|
|   |   |   | . |   |   |   |   |   | . | . | . | . | . | . | . |
|   |
|   |
|   |
|   |   |
| . |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |
|   |   |
|
|
Alig confidence |   |
|
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|
| . | . | . | . |
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| . |
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| . | . | . | . | . | . | . |
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| . |
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|
| . | . |
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|
Template Conservation |   |
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
| . | . |   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
S | E | E | L | L | L | K | V | G | E | E | I | K | R | L | S | E | K | F | K | E | V | E | F | V | F | K | S | S | F | D | K | A | N | R | S | S | I | H | S | F | R | G | H | G | L | E | Y | G | V | K | A | L | R | K | V | K | E | E | F | G | L | K | I | T | T | D | I | . |
. |
H | E | S | W | Q | A | E | P | V | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |
| B | S |
|
| T | T |
| S | S | T | T | S |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
| . | . | S | S | G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
1015 | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | |
|
. | . | . | . | . | . | . | 1090 | . | . |
  |
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
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|
Query Sequence |   |
N | A | G | L | D | Y | Y | N | H | N | L | D | T | S | P | E | F | Y | G | N | I | I | T | T | R | T | Y | Q | E | R | L | D | T | L | E | K | V | R | D | A | G | I | K | V | C | S | G | G | I | V | G | L | G | E | T | V | K | D | R | A | G | L | L | L | Q | L | A | N | L | P | T | P | P | E | S | V | P | I | N | M |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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|
|
|
|
| . |
|
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|
|
Template Conservation |   |
  |   | . |
|
|   |   |
|
|
|
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |
|   |   |
|
|
|
| . | . |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |
|
|   | . |   |
|   |
|   |   |
|
Template Sequence |   |
E | V | . |
A | D | I | I | Q | I | P | A | F | L | C | R | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | D | L | L | L | A | A | A | K | T | G | R | A | V | . |
. |
N | V | K | K | G | Q | F | L | A | P | W | D | T | K | N | V | V | E | K | L | K | F | G | G | A | K | . |
E | I | Y | L | T | E | R |
Template Known Secondary structure |   |
T | T | . |
| S |  |  |  |  |
| G | G | G | T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T | T | S |  |  | . | . |  |  |  |
|
| T | T |
|
| G | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
| S | . | S |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  | . |  |  |  |  |  |
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
  |   |
1093 | . | |
. | . | . | . | . | 1100 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | |
|
. | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | |
. | . | 1150 | . | . | . | . |
  |
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | |
|
|
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|
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|
|
|
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
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|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
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|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
Query Sequence |   |
L | V | K | V | K | G | T | P | L | A | D | N | D | D | V | D | A | F | D | F | I | R | T | I | A | V | A | R | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | M | P | T | S | Y | V | R | L | S | A | G | R | E | Q | M | N | E | Q | T | Q | A | M | C | F | M | A | G | A | N | S | I | F | Y | G | C | K | L | L |
Query Conservation |   |
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
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|
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|
|
|
| . | . | . | . | . | . | . | . |
|
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| . | . | . | . | . | . | . | . | . | . | . | . |
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|
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|
|
| . |
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |
|   |
|   |
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|   |
|   |
|
|
| . |   |
|   |
Template Sequence |   |
G | T | T | F | G | Y | N | N | L | V | V | D | . |
. |
. |
. |
. |
. |
. |
. |
F | R | S | L | P | I | M | K | Q | W | A | K | V | I | Y | D | A | T | H | S | V | Q | L | P | G | G | L | G | D | K | S | G | G | M | R | E | F | I | F | P | L | I | R | A | A | V | A | V | G | C | D | G | V | F | M | E | . |
T | H | P |
Template Known Secondary structure |   |
|  |  |
| S | T | T |
|  |  |
|
| . | . | . | . | . | . | . | . | T | T |  |  |  |  |  | T | T | T | S |  |  |  |  |  | T | T | G | G | G |  |  | T | T |
| S | S | S | S |
|  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  | . |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
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|
  |   |
1155 | . | . | . | . | 1160 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | |
. | . | . |
  |
  |   |
292 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
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|
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|
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|
|
Query Sequence |   |
T | T | P | N | P | . |
. |
. |
. |
. |
. |
. |
. |
E | E | D | K | D | L | Q | L | F | R | K | L |
Query Conservation |   |
|   |   |
|   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|
|   |   |   |
|
|   |
|   |
|
|   |   |
|   |   |   |
|
Template Sequence |   |
E | P | E | K | A | L | S | D | A | S | T | Q | L | P | L | S | Q | L | E | G | I | I | E | A | I |
Template Known Secondary structure |   |
S | G | G | G |
| S | S |
| T | T | T |
|  |  | G | G | G |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1226 | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 |
  |