Job Description P12996 Confidence 90.94% Date Thu Jan 5 11:33:15 GMT 2012 Rank 109 Aligned Residues 145 % Identity 17% Template d1w0ma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.5

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.																									.	.	.	.										.	.	.	.	.										.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																									.	.	.	.										.	.	.	.	.										.	.
Template Sequence		L	E	N	I	K	E	A	G	G	S	G	V	I	L	N	H	.	.	.	.	.	.	.	.	.	S	E	A	P	L	K	L	N	D	L	A	R	L	V	A	K	A	K	S	L	G	L	D	V	.	.	.	.	V	V	C	A	P	D	P	R	T	.	.	.	.	.	S	L	A	A	A	A	L	G	P	.	.	H	A
Template Known Secondary structure									T									.	.	.	.	.	.	.	.	.	T	T	S																	T	T				.	.	.	.					S	S				.	.	.	.	.							T			.	.	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																									.	.	.	.										.	.	.	.	.										.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.										.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.			.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E
Query Conservation
Alig confidence											.			.																																		.	.																						.
Template Conservation											.			.																																		.	.																						.
Template Sequence		V	A	V	E	P	P	E	L	I	.	G	T	.	G	R	A	V	S	R	Y	K	P	E	A	I	V	E	T	V	G	L	V	S	R	H	F	P	E	V	S	V	I	T	G	A	G	.	.	I	E	S	G	D	D	V	A	A	A	L	R	L	G	T	R	G	V	L	L	A	.	S	A	A	V	K	A	K	D	P	Y
Template Known Secondary structure							G	G	G	T	.	T	T	.	S																							T	T	S						S	S	.	.			S										T	T		S						.					T		S	S
Template Predicted Secondary structure											.			.																																		.	.																						.
Template SS confidence
		138	.	140	.	.	.	.	.	.		.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.
		299	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	D	L	Q	L	F	R	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	I	V	E	L	A	K	P	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions