|   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | E | Q | V | L | E | S | A | R | K | A | K | A | A | G | S | T | R | F | C | M | G | . |
. |
. |
. |
. |
A | A | W | K | N | P | H | E | R | D | M | P | Y | L | E | Q | M | V | Q | G | V | K | A | M | G | L | E | A | C | M | T | L | G | T | L | S | E | S | Q | A | Q | R | L | A | N | A | G | L | D | Y | Y | N |
Query Conservation |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
| . | . | . | . | . |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|
|
|
|   |
|
|
| . | . |   |
|   |   |   |   |   |   |
|   |   |   | . |
|
|   |
|
|
Template Sequence |   |
G | R | E | M | L | M | E | T | A | H | F | L | S | E | L | G | V | K | V | L | R | G | G | A | Y | K | P | R | T | S | P | Y | S | F | Q | G | L | G | E | K | G | L | E | Y | L | R | E | A | A | D | K | Y | G | M | Y | V | V | T | E | A | . |
. |
L | G | E | D | D | L | P | K | V | A | E | Y | . |
A | D | I | I | Q |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
| B | S |
|
|
|
|
| S | T | T | S |
|
|
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
| . | . | S | S | G | G | G |  |  |  |  |  |  |  | . |
| S |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
. | . | . | . | 170 | . | . | . | . | . | . | . | |
. | . | 180 | . | . |
  |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
H | N | L | D | T | S | P | E | F | Y | G | N | I | I | T | T | R | T | Y | Q | E | R | L | D | T | L | E | K | V | R | D | A | G | I | K | V | C | S | G | G | I | V | G | L | G | E | T | V | K | D | R | A | G | L | L | L | Q | L | A | N | L | P | T | P | P | E | S | V | P | I | N | M | . |
. |
L | V | K | V | K | G |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|   |   | . | . |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |
|   |   |
|
|
|
| . | . |   |
|
|   |
|   |   |   |
|
|   |
|   |   |   |
|
|
|   |
|   |   |   |
|
| . | . |   |   |
|   |
|   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
I | G | A | R | N | A | Q | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | R | L | L | S | K | A | G | S | Y | N | K | P | V | . |
. |
L | L | K | R | G | F | M | N | T | I | E | E | F | L | L | S | A | E | Y | I | A | N | S | G | N | . |
. |
T | K | I | I | L | C | E | R | G | I | R | T | F | E | K |
Template Known Secondary structure |   |
 |
| G | G | G | T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
| S |
|  | . | . |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . |
|
|  |  |  |  |  |
|
| B |
|
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
  |
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
T | P | L | A | D | N | D | D | V | D | A | F | D | F | I | R | T | I | A | V | A | R | I | M | M | P | T | S | Y | V | R | L | . |
. |
. |
. |
. |
. |
S | A | G | R | E | Q | M | N | E | Q | T | Q | A | M | C | F | M | A | G | A | N | S | I | F | Y | G | C | K | L | L | T | T | P | N | P | . |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|   | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |
|
| . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |   |   |   | . | . | . |   |
|
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |
|
|
| . |   |
|   |   |
|
|   |
|
|   |
|   |   |   |
|
Template Sequence |   |
A | T | R | N | T | L | D | I | . |
. |
. |
. |
. |
. |
. |
S | A | V | P | I | I | R | K | E | S | H | . |
. |
. |
L | P | I | L | V | D | P | S | H | S | G | G | R | R | D | L | V | I | P | L | S | R | A | A | I | A | V | G | A | H | G | I | I | V | E | . |
V | H | P | E | P | E | K | A | L | S | D | G | K | Q | S |
Template Known Secondary structure |   |
S | S | S | S | B |
|
| T | . | . | . | . | . | . | . | T |  |  |  |  |  |  |  |  | B | S | . | . | . | S |
|  |  |  |
|  |  |  |  |  |
| S | G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | . | B |
| S |
| G | G | G |
| S | S |
| G | G | G |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
245 | . | . | . | . | 250 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 260 | . | . | . | |
|
|
. | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | |
. | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
  |
  |   |
|
297 | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
E | E | D | K | D | L | Q | L | F | R | K | L |
Query Conservation |   |
. |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
L | D | F | E | L | F | K | E | L | V | Q | E | M |
Template Known Secondary structure |   |
B |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
314 | . | . | . | . | . | 320 | . | . | . | . | . | . |
  |