Job Description P12996 Confidence 27.03% Date Thu Jan 5 11:33:15 GMT 2012 Rank 480 Aligned Residues 165 % Identity 15% Template d1ttja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C
Query Conservation
Alig confidence																									.																														.	.	.	.	.																						.
Template Conservation																									.																														.	.	.	.	.																						.
Template Sequence		T	S	S	H	L	A	M	T	K	E	R	L	S	H	P	K	F	V	I	A	A	Q	N	.	A	G	N	A	D	A	L	A	S	L	K	D	F	G	V	N	W	I	V	L	G	H	S	E	R	R	A	Y	Y	.	.	.	.	.	G	E	T	N	E	I	V	A	D	K	V	A	A	A	V	A	S	G	F	M	V	.
Template Known Secondary structure																T	T						S		.			S										T	T							S								S	.	.	.	.	.																	T	T				.
Template Predicted Secondary structure																									.																														.	.	.	.	.																						.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	.	.	.	.	.	.	.	.	.	.	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	.	.	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence		.	.	.													.	.	.	.	.	.	.	.	.	.																									.	.				.	.	.	.
Template Conservation		.	.	.																																																				.	.	.	.
Template Sequence		.	.	.	I	A	C	I	G	E	T	L	Q	E	R	E	S	G	R	T	A	V	V	V	L	T	Q	I	A	A	I	A	K	K	L	K	K	A	D	W	A	K	V	V	I	A	Y	E	P	V	W	A	I	G	T	.	.	.	.	G	K	V	A	T	P	Q	Q	A	Q	E	A	H	A	L	I	R	S	W	V	S	S
Template Known Secondary structure		.	.	.													T	T															T	T			G	G	G	G	G	G								G	G	G	T	T	T	.	.	.	.	S
Template Predicted Secondary structure		.	.	.																																																				.	.	.	.
Template SS confidence
					124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		257	.								.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		S	Y	.	.	.	.	.	.	.	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	G	A	D	V	A	G	E	L	R	I	L	Y	G	G	S	V	N	G	K	N	A	R	T	L	Y	Q	Q	R	D	V	N	G	F	L	V	G
Template Known Secondary structure			T														S	S			T	T	T						T	S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions