Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence46.55%DateThu Jan 5 11:33:15 GMT 2012
Rank348Aligned Residues136
% Identity21%Templated1suxa_
SCOP infoTIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM)
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.........170.........180.........190.........200.. ......
Predicted Secondary structure 





















..........
Query SS confidence 































































. . . . . . . . . .





Query Sequence  AQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDR. . . . . . . . . . AGLLLQ
Query Conservation 
  

 

        


      
        

  
  
   

 
  
 
 




 

 ..........   
  
Alig confidence 















...









..

















....










..........





Template Conservation 
 



 
   




...



  
 

..
  
  

  

  

 
....





   

        
  

   
Template Sequence  LQILKDYGISWVVLGH. . . SERRLYYGET. . NEIVAEKVAQACAAGFHV. . . . IVCVGETNEEREAGRTAAVVLTQLAAV
Template Known Secondary structure  TT

S
...S


..TT
....


TT
Template Predicted Secondary structure 





...


..


....





Template SS confidence 















































































   81........90...... ...100...... ...110.........120.... .....130.........140.........150.
 
   209210.........220....... ..230.........240.........250....... ..260.........270.........
Predicted Secondary structure 







..















.......



Query SS confidence 


















. .





























. . . . . . .





















Query Sequence  LANLPTPPESVPINMLVKV. . KGTPLADNDDVDAFDFIRTIAVARIMMPTS. . . . . . . YVRLSAGREQMNEQTQAMCFMA
Query Conservation 

 
      
 
  
 
 ..




         
 

 

  

 

  ....... 
    
            
 
Alig confidence 


















..


....






















.......





















Template Conservation 
  
       












....
  

 
 
  
   

  
        
  
 






   
   
    
Template Sequence  AQKLSKEAWSRVVIAYEPVWAIGT. . . . GKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMR
Template Known Secondary structure  TT

TGGGGG

GGGSSS....S





SS

TST
Template Predicted Secondary structure 











....

















Template SS confidence 















































































   152.......160.........170..... ....180.........190.........200.........210.........220.......
 
   280.......
Predicted Secondary structure 



Query SS confidence 







Query Sequence  GANSIFYG
Query Conservation 


    
Alig confidence 







Template Conservation   


 


Template Sequence  DINGFLVG
Template Known Secondary structure  T

S
Template Predicted Secondary structure 



Template SS confidence 







   228.230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions