Job Description P12996 Confidence 73.21% Date Thu Jan 5 11:33:15 GMT 2012 Rank 197 Aligned Residues 110 % Identity 13% Template d1s99a_ SCOP info Ferredoxin-like MTH1187/YkoF-like Putative thiamin/HMP-binding protein YkoF Resolution 1.65

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	E	K	P	L	L	D	L	L	F	E	A	Q	Q	V	H	R	Q	H	F	D	P	R	Q	V	Q	V	S	T	L	L	S	I	K	T	G	A	C	P	E	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	C	P	Q	S	S	R	Y	K	T	G	L	E	A	E
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																							.													.																																					.
Template Sequence		V	L	R	G	S	I	D	H	V	F	D	A	A	K	A	I	Y	L	H	A	A	.	N	S	E	Q	H	I	V	X	N	G	T	F	.	S	I	G	C	P	G	D	T	Q	G	D	T	Y	L	D	K	R	V	N	E	D	A	V	R	G	L	K	A	E	A	P	C	Q	F	A	L	.	Y	P	X	N	E	P	D	Y
Template Known Secondary structure																							.	T	T		S									.					T	T			S		S	S						T	T	T	T	T	T	T	T				B								.			T	T		T	T
Template Predicted Secondary structure																							.													.																																					.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		R	L	M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	.	.	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L
Query Conservation																					.	.
Alig confidence		.	.	.	.																.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	X	G	L	I	X	E	A	V	D	I	A	K	A	Q	G	T	F	V	Q	G	V	H	Y	A	S	E	L	D	G	D	A	H	D	V	F	S	T	L	E	A	V	F	R	X	A	E	Q	Q	T	N	H	I	T	X	T	V
Template Known Secondary structure		.	.	.	.														T	T							T	T						S	B																				S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions