Job Description P12996 Confidence 98.06% Date Thu Jan 5 11:33:15 GMT 2012 Rank 20 Aligned Residues 214 % Identity 12% Template d1nvma2 SCOP info TIM beta/alpha-barrel Aldolase HMGL-like Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.
Query Sequence		L	M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	.	.	.	.	.	.	.	.	.	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	A	N	A
Query Conservation																										.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Y	T	L	D	D	V	R	A	I	A	R	A	L	D	K	A	K	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	R	H	T	D	L	E	Y	I	E	A	V	A	G	E	I	S	H	A	Q	I	A	T	L	L	L	P	G	I	G	S	V	H	D	L	K	N	A	Y	Q	A
Template Known Secondary structure																			T		S					S		T	T	S	T	T			B	T	T	T	B			S	S											T	T		S	S	S								B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																														.	.					.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.																																														.	.					.	.	.	.	.
Template Sequence		G	A	R	V	V	R	V	A	T	H	C	T	E	.	.	.	.	.	.	.	.	.	.	.	A	D	V	S	K	Q	H	I	E	Y	A	R	N	L	G	M	D	T	V	G	F	L	M	M	S	H	M	I	P	A	E	K	L	A	E	Q	G	K	L	M	E	S	Y	G	A	.	.	T	C	I	Y	.	.	.	.	.
Template Known Secondary structure		T										T	T		.	.	.	.	.	.	.	.	.	.	.	G	G	G	G											T									S	T	T	S	S																T		.	.	S				.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																														.	.					.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																															.														.																.	.	.
Query SS confidence																															.														.																.	.	.
Query Sequence		K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	.	P	T	S	Y	V	R	L	S	A	G	R	E	Q	.	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	.	.	.	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K
Query Conservation																															.														.																.	.	.
Alig confidence		.					.	.	.	.																					.														.																.	.	.						.
Template Conservation		.					.	.	.	.																																																											.
Template Sequence		.	M	A	D	S	.	.	.	.	G	G	A	M	S	M	N	D	I	R	D	R	M	R	A	F	K	A	V	L	K	P	E	T	Q	V	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	V	A	V	E	E	G	C	D	R	V	D	A	S	L	A	G	.	M	G	A	G	A	G	N	A	P	L	E	V
Template Known Secondary structure		.				T	.	.	.	.	T																			S		T	T	S							B		T	T	S												T	T							B	G	G	G	.		S	S	T	T		B		B
Template Predicted Secondary structure		.					.	.	.	.																																																											.
Template SS confidence
			168	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.
		301	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Q	L	F	R	K	L	G	L	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	A	V	A	E	R	L	G	W	N	H
Template Known Secondary structure										T		B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions