Job Description P12996 Confidence 42.31% Date Thu Jan 5 11:33:15 GMT 2012 Rank 377 Aligned Residues 135 % Identity 16% Template d1neya_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.20

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.											.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	.	.	.	.	.	.	.	.	.	.	A	G	L	L	L	Q
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.											.	.																			.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.											.	.																			.	.	.	.
Template Sequence		V	D	Q	I	K	D	V	G	A	K	Y	V	I	L	G	H	.	.	.	S	E	R	R	S	Y	F	H	E	D	.	.	D	K	F	I	A	D	K	T	K	F	A	L	G	Q	G	V	G	V	.	.	.	.	I	L	C	I	G	E	T	L	E	E	K	K	A	G	K	T	L	D	V	V	E	R	Q	L	N	A	V
Template Known Secondary structure								T	T							S		.	.	.						T	T				.	.														T	T				.	.	.	.													T	T
Template Predicted Secondary structure																		.	.	.											.	.																			.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	.	.	.	.	.	.	.	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence											.	.									.	.	.																												.	.	.	.	.	.	.
Template Conservation											.	.									.	.	.
Template Sequence		L	E	E	V	K	D	F	T	N	.	.	V	V	V	A	Y	E	P	V	.	.	.	A	I	G	T	G	L	A	A	T	P	E	D	A	Q	D	I	H	A	S	I	R	K	F	L	A	S	K	L	G	D	K	A	A	S	E	L	R	I	L	Y	G	G	S	A	N	G	S	N	A	V	T	F	K	D	K	A	D	V
Template Known Secondary structure									T	T	.	.									.	.	.		T	T	T	S																																					S	S			T	T	T	G	G	G	G	T	T		T	T
Template Predicted Secondary structure											.	.									.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		282	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	I	F	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	F	L	V	G
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions