Job Description P12996 Confidence 43.41% Date Thu Jan 5 11:33:15 GMT 2012 Rank 369 Aligned Residues 136 % Identity 17% Template d1n55a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 0.83

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	.	.	.	.	.	.	.	.	.	.	G	L	L	L	Q
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																						.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																						.	.	.	.
Template Sequence		M	P	I	L	K	D	I	G	V	H	W	V	I	L	G	H	S	E	R	R	T	Y	Y	.	.	.	.	.	G	E	T	D	E	I	V	A	Q	K	V	S	E	A	C	K	Q	G	F	M	V	.	.	.	.	I	A	C	I	G	E	T	L	Q	Q	R	E	A	N	Q	T	A	K	V	V	L	S	Q	T	S	A	I
Template Known Secondary structure									T							S								S	.	.	.	.	.																	T	T				.	.	.	.													T	T
Template Predicted Secondary structure																									.	.	.	.	.																						.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																															.	.	.	.	.	.	.
Query SS confidence																					.	.																															.	.	.	.	.	.	.
Query Sequence		L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	.	.	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	.	.	.	.	.	.	.	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A
Query Conservation																					.	.																															.	.	.	.	.	.	.
Alig confidence																					.	.				.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		A	A	K	L	T	K	D	A	W	N	Q	V	V	L	A	Y	E	P	V	W	A	I	G	T	.	.	.	.	G	K	V	A	T	P	E	Q	A	Q	E	V	H	L	L	L	R	K	W	V	S	E	N	I	G	T	D	V	A	A	K	L	R	I	L	Y	G	G	S	V	N	A	A	N	A	A	T	L	Y	A	K	P
Template Known Secondary structure			T	T			G	G	G	G	G	G								G	G	G	S	S	S	.	.	.	.	S																							T														S	S			T	T	T						T	S	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N	S	I	F	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	N	G	F	L	V	G
Template Known Secondary structure		T							S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions