Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence98.43%DateThu Jan 5 11:33:15 GMT 2012
Rank14Aligned Residues216
% Identity14%Templated1h5ya_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes
Resolution2.0

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120 .........130.........140.........150......
Predicted Secondary structure 












.















..
Query SS confidence 








































.



































. .
Query Sequence  QVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGV. KAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDT. .
Query Conservation 

   
      
   
 




        
 
 
 
  
.      
  
 
 
  
 
  

 

        

..
Alig confidence 



















..


















.



































..
Template Conservation 

   
      

  
 
 ..


    
       
  
     


    

   
 
      


 
 
      
Template Sequence  DPVEMAVRYEEEGADEIAIL. . DITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR
Template Known Secondary structure 
TT
S
..



TTT
SS
SS

ST
SS
Template Predicted Secondary structure 




..




















Template SS confidence 















































































   34.....40.........50... ......60.........70.........80.........90.........100.........110.
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADND
Query Conservation 
      
        

  
  
   

 
  
 
 




 

    
  

 
      
 
  
 
 




    
Alig confidence 












.











































..





......







Template Conservation               .        
         
                       
 ..  

  ......     
  
Template Sequence  NPQLVALLAREFG. SQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGA. . GEILLT. . . . . . SIDRDGTG
Template Known Secondary structure 
T
.GGG
SSSTTTTT
..S......TTTTTT
Template Predicted Secondary structure 


.




















..
......







Template SS confidence 















































































   112.......120.... .....130.........140.........150.........160........ .170.... .....180..
 
   237..240.........250.........260.........270.........280.........290.........300.........310...
Predicted Secondary structure 





























Query SS confidence 












































































Query Sequence  DVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQ
Query Conservation       
 

 

  

 

   
    
            
 



    
   

  
     
   
   
  
 
Alig confidence 













....









..




















.
























Template Conservation   
        
   ....   



 

..
 
  
       


 



.


             
        
Template Sequence  LGYDVELIRRVADS. . . . VRIPVIASGG. . AGRVEHFYEAAAAGADAVLAA. SLFHFRVLSIAQVKRYLKERGVEVR
Template Known Secondary structure  S


....
SS
S
..

STT
SS.TTSS
TT
B

Template Predicted Secondary structure 





....




..






.










Template SS confidence 












































































   183......190...... ...200...... ...210.........220....... ..230.........240.........250..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions