|   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
Q | V | L | E | S | A | R | K | A | K | A | A | G | S | T | R | F | C | M | G | A | A | W | K | N | P | H | E | R | D | M | P | Y | L | E | Q | M | V | Q | G | V | . |
K | A | M | G | L | E | A | C | M | T | L | G | T | L | S | E | S | Q | A | Q | R | L | A | N | A | G | L | D | Y | Y | N | H | N | L | D | T | . |
. |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |
| . |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|   | . | . |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
D | P | V | E | M | A | V | R | Y | E | E | E | G | A | D | E | I | A | I | L | . |
. |
D | I | T | A | A | P | E | G | R | A | T | F | I | D | S | V | K | R | V | A | E | A | V | S | I | P | V | L | V | G | G | G | V | R | S | L | E | D | A | T | T | L | F | R | A | G | A | D | K | V | S | V | N | T | A | A | V | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  | . | . |  |
|
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |  |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | E | F | Y | G | N | I | I | T | T | R | T | Y | Q | E | R | L | D | T | L | E | K | V | R | D | A | G | I | K | V | C | S | G | G | I | V | G | L | G | E | T | V | K | D | R | A | G | L | L | L | Q | L | A | N | L | P | T | P | P | E | S | V | P | I | N | M | L | V | K | V | K | G | T | P | L | A | D | N | D |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |
|
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . |   |   |
|
|   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
Template Sequence |   |
N | P | Q | L | V | A | L | L | A | R | E | F | G | . |
S | Q | S | T | V | V | A | I | D | A | K | W | N | G | E | Y | Y | E | V | Y | V | K | G | G | R | E | A | T | G | L | D | A | V | K | W | A | K | E | V | E | E | L | G | A | . |
. |
G | E | I | L | L | T | . |
. |
. |
. |
. |
. |
S | I | D | R | D | G | T | G |
Template Known Secondary structure |   |
| T |  |  |  |  |  |  |  |  |  |  |
| . | G | G | G |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | S |  |  |  |  |  | . | . | . | . | . | . |  | T | T | T | T | T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | |
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
. | 170 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 180 | . | . |
  |
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | D | A | F | D | F | I | R | T | I | A | V | A | R | I | M | M | P | T | S | Y | V | R | L | S | A | G | R | E | Q | M | N | E | Q | T | Q | A | M | C | F | M | A | G | A | N | S | I | F | Y | G | C | K | L | L | T | T | P | N | P | E | E | D | K | D | L | Q | L | F | R | K | L | G | L | N | P | Q |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . |   |   |   |
|
|
|
|   |
|
| . | . |
|   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|
| . |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
L | G | Y | D | V | E | L | I | R | R | V | A | D | S | . |
. |
. |
. |
V | R | I | P | V | I | A | S | G | G | . |
. |
A | G | R | V | E | H | F | Y | E | A | A | A | A | G | A | D | A | V | L | A | A | . |
S | L | F | H | F | R | V | L | S | I | A | Q | V | K | R | Y | L | K | E | R | G | V | E | V | R |
Template Known Secondary structure |   |
S |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |
| S | S |
|  |  |  |  | S |
| . | . |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S | . |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
|
|
. | . | . | 200 | . | . | . | . | . | . | |
|
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
  |