 |
Job Description | P12996 | Confidence | 73.99% | Date | Thu Jan 5 11:33:15 GMT 2012 |
Rank | 191 | Aligned Residues | 71 |
% Identity | 18% | Template | d1ea9c3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 3.2 |
|
 |
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | |
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
. | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | Q | A | Q | R | L | A | N | A | G | L | D | Y | Y | N | H | N | L | D | T | . |
. |
. |
. |
. |
. |
. |
. |
S | P | E | F | Y | G | N | I | I | T | T | R | . |
T | Y | Q | E | R | L | D | T | L | E | K | V | R | D | A | G | I | K | V | C | S | G | G | I | V | G | L | . |
G | E | T | V | K | D | R | A | G | L |
Query Conservation |   |
  |
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |
|
| . |
|
|
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | D | H | L | D | H | L | S | K | L | G | V | N | A | V | Y | F | T | P | L | F | K | A | T | T | N | H | K | Y | D | T | E | D | Y | F | Q | I | D | P | Q | F | G | D | K | D | T | L | K | K | L | V | D | L | C | H | E | R | G | I | R | V | L | L | D | A | V | F | N | H | S | G | R | T | F | P | P | F | V | D | V |
Template Known Secondary structure |   |
 |  | T |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
| S | S |
| S | S | S | S | T | T | S |
| S |
| T | T |
|
|
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|  |  |  |  |  |
|
|
| S | B |
|
| T | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
  |
  |   |
206 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
L |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
L |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
255 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|