 |
| Job Description | P12996 | | Confidence | 58.00% | Date | Thu Jan 5 11:33:15 GMT 2012 |
| Rank | 287 | Aligned Residues | 59 |
| % Identity | 14% | Template | d1cgta4 |
| SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
| Resolution | 2.00 |
|
 |
| | |
137 | . | . | |
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
. | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | |
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
| Predicted Secondary structure | |
 | | | . | . | | | | | |
|
|
|  | | |  |
|
| . | . |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| | | | | | | |
|
|
|
| . |
| | | | | | | | | | | | | |
|
|
| | | | | | | | |
| Query SS confidence | |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
S | Q | A | . |
. |
Q | R | L | A | N | A | G | L | D | Y | Y | N | H | N | . |
. |
L | D | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | P | E | F | Y | G | N | I | I | T | T | R | . |
T | Y | Q | E | R | L | D | T | L | E | K | V | R | D | A | G | I | K | V | C | S | G | G | I | V |
| Query Conservation | |
| |
| . | . | | |
|
| |
|
| | | | | | | | . | . | |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| | | | | | |
| | | | | . | | | | |
|
| | |
| | |
| | | |
|
| |
| | |
| |
| |
| Alig confidence | |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| | |
|
|
|
| |
|
|
| | |
| |
| |
|
| | | | | | | | | | | | | | | | | | |
|
|
| | | |
| | | |
|
| | | |
|
| | |
|
|
| |
|
| | | |
| | |
|
| |
|
|
|
| |
| |
| Template Sequence | |
N | K | I | N | D | N | Y | F | S | D | L | G | V | T | A | L | W | I | S | Q | P | V | E | N | I | F | A | T | I | N | Y | S | G | V | T | N | T | A | Y | H | G | Y | W | A | R | D | F | K | K | T | N | P | Y | F | G | T | M | A | D | F | Q | N | L | I | T | T | A | H | A | K | G | I | K | I | V | I | D | F | A | P |
| Template Known Secondary structure | |
| | | | T | T | | | | | | T |
|
| | | | |
|
|
| | | |
|
| S |
| | | | T | T | | | |
|
| T | T | S |
| S | | | | | | | |
| T | T | T |
|
| | | | | | | | | | | | | | T | T |
| | | | | | |
| T |
| Template Predicted Secondary structure | |
| | |
|
|
| | | | |
|
|
|
| | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | | | |
|
|
| | | | | | |
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
| |
| | |
194 | . |
| Predicted Secondary structure | |
|
|
| Query SS confidence | |
|
|
| Query Sequence | |
G | L |
| Query Conservation | |
|
|
| Alig confidence | |
|
|
| Template Conservation | |
|
|
| Template Sequence | |
N | H |
| Template Known Secondary structure | |
T | |
| Template Predicted Secondary structure | |
|
|
| Template SS confidence | |
|
|
| | |
139 | 140 |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
