Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence53.79%DateThu Jan 5 11:33:15 GMT 2012
Rank307Aligned Residues59
% Identity15%Templatec3ucqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:amylosucrase; PDBTitle: crystal structure of amylosucrase from deinococcus geothermalis
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150 ...... ...160........ .170.........180.........190.....
Predicted Secondary structure 


..........




.




.





Query SS confidence 













. . . . . . . . . .





.











.


























Query Sequence  SQAQRLANAGLDYY. . . . . . . . . . NHNLDT. SPEFYGNIITTR. TYQERLDTLEKVRDAGIKVCSGGIVGL
Query Conservation 
 
  

 

    ..........    

.
      
    .    

  
  
   

 
  
 
 

Alig confidence 













..........





.











.


























Template Conservation   





 


  
 
 

          

   

  


 


 



 

  

  

 



 
 

Template Sequence  ERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVLDLVLNH
Template Known Secondary structure  TTTT





SS

GGGTS
GGG

TT


S
Template Predicted Secondary structure 





































Template SS confidence 






































































   110.........120.........130.........140.........150.........160.........170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions