Job Description P12996 Confidence 94.46% Date Thu Jan 5 11:33:15 GMT 2012 Rank 83 Aligned Residues 198 % Identity 12% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	.	.	.	.	.	L	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence																								.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																								.	.	.
Template Sequence		N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	.	.	.	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	T	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S
Template Known Secondary structure												T	G	G	G	S	S		S					.	.	.				S	S					S	S													T	T												T				S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	S	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																						.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																						.
Template Sequence		Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	.	.	.	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	.
Template Known Secondary structure														T	T					.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			G	G	G												T				.	.	.						T	T	S										T	T			.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																						.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.														.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.											.	.	.	.	.																																										.												.
Template Conservation		.	.	.	.	.	.	.											.	.	.	.	.																																										.												.
Template Sequence		.	.	.	.	.	.	.	G	F	I	Y	L	L	A	S	I	G	.	.	.	.	.	I	T	G	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	.	X	R	K	V	A	D	G	V	I	V	G	.	T	S	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	S								S		.	.	.	.	.	S	S																			T	T			S						S	S			S	S						.		T	T	T	S	S						.
Template Predicted Secondary structure		.	.	.	.	.	.	.											.	.	.	.	.																																										.												.
Template SS confidence
									163	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.		.	.	.	.
		293			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		T	.	.	P	N	P	E	E	D	K	D	L	Q	L	F	R	K	L
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		K	C	F	K	Q	G	N	L	D	I	I	X	K	D	I	E	E	I
Template Known Secondary structure				T	T	S	S												T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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