Job Description P12996 Confidence 100.00% Date Thu Jan 5 11:33:15 GMT 2012 Rank 4 Aligned Residues 303 % Identity 19% Template c3t7vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methylornithine synthase pylb; PDBTitle: crystal structure of methylornithine synthase (pylb) Resolution 1.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		R	W	T	L	S	Q	V	T	E	L	F	E	K	P	L	.	.	.	L	D	L	L	F	E	A	Q	Q	V	H	R	Q	H	F	D	P	R	Q	V	Q	V	S	T	L	L	S	I	K	T	G	A	C	P	E	D	C	K	Y	C	P	Q	S	S	R	Y	K	T	G	L	E	A	E	R	L	M	E	V	E	Q	V	L
Query Conservation																	.	.	.
Alig confidence																	.	.	.																													.																				.	.	.
Template Conservation																																																.																				.	.	.
Template Sequence		Q	L	T	D	N	D	L	R	T	L	L	S	L	E	S	K	E	G	L	E	R	L	Y	S	A	A	R	K	V	R	D	H	Y	F	G	N	R	V	F	L	N	C	F	I	Y	F	.	S	T	Y	C	K	N	Q	C	S	F	C	Y	Y	N	C	R	N	E	I	.	.	.	N	R	Y	R	L	T	M	E	E	I	K
Template Known Secondary structure													T			S																				T	T											.									T	T		T	T		T	T	S			.	.	.				B
Template Predicted Secondary structure																																																.																				.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160
Predicted Secondary structure																																								.																																					.
Query SS confidence																																								.																																					.
Query Sequence		E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	.	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	.	S	P	E	F
Query Conservation																																								.																																					.
Alig confidence																																								.																																					.
Template Conservation
Template Sequence		E	T	C	K	T	L	K	G	A	G	F	H	M	V	D	L	T	M	G	E	D	P	Y	Y	Y	E	D	P	N	R	F	V	E	L	V	Q	I	V	K	E	E	L	G	L	P	I	M	I	S	P	G	L	M	D	N	A	T	L	L	K	A	R	E	K	G	A	N	F	L	A	L	Y	Q	E	T	Y	D	T	E	L
Template Known Secondary structure								T	T	S			S															S	T																S							S	S												T	T									B		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A
Query Conservation
Alig confidence																																																								.	.
Template Conservation																																																								.	.
Template Sequence		Y	R	K	L	R	V	G	Q	S	F	D	G	R	V	N	A	R	R	F	A	K	Q	Q	G	Y	C	V	E	D	G	I	L	T	G	V	G	N	D	I	E	S	T	I	L	S	L	R	G	M	S	T	N	D	P	.	.	D	M	V	R	V	M	T	F	L	P	Q	E	G	T	P	L	E	G	F	R	D	K	S	N
Template Known Secondary structure						S	T	T																	T										S	S	S																T			.	.	S											T	T	S	T	T	T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.														.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q	L	F	R	K
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		L	S	E	L	K	I	I	S	V	L	R	L	M	F	P	K	R	.	.	L	I	P	A	S	L	D	L	E	G	I	D	G	M	V	L	R	L	N	A	G	A	N	I	V	T	S	I	L	P	P	D	S	Q	L	E	G	V	A	N	Y	D	R	D	L	E	E	R	D	R	D	I	K	S	V	V	R	R	L	E	I
Template Known Secondary structure															S	T	T	S	.	.	B																			T	T										S	S						S	S		T	T	T	T		S	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		308	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	N	P	Q	Q	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	M	K	P	A	R	Q	A
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions