Job Description P12996 Confidence 34.78% Date Thu Jan 5 11:33:15 GMT 2012 Rank 422 Aligned Residues 200 % Identity 15% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T
Query Conservation
Alig confidence																										.																			.	.	.										.	.													.
Template Conservation																										.																			.	.	.										.	.													.
Template Sequence		S	E	Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	N	V	P	F	I	.	Y	K	S	S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	.	.	.	L	G	L	P	V	L	T	D	V	.	.	H	S	I	D	E	I	E	Q	V	A	S	V	.	V	D	V	L	Q	T	P	A	F	L
Template Known Secondary structure																				T	T					.																			.	.	.		T								.	.		S									T	T	.		S						G	G	G
Template Predicted Secondary structure																										.																			.	.	.										.	.													.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	.	.	.	.	.	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P
Query Conservation																																																										.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																								.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		C	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	F	I	H	A	C	A	R	S	G	K	P	V	.	.	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	Y	N	N
Template Known Secondary structure		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S	S			.	.						T	T	S		G	G	G															T	T			S													S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		114	.	.															.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.									.	.
Predicted Secondary structure																																		.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	.	.	.	.	.	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	.	.	.	.	.	.	.	.	E	E
Query Conservation																																		.	.	.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																					.	.	.	.	.																									.									.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																																																		.
Template Sequence		L	V	S	D	.	.	.	.	.	.	.	.	M	R	S	L	A	I	M	R	E	T	S	A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V	L	A	R	A	A	V	A	T	G	V	A	G	L	F	M	E	.	T	H	P	N	P	A	E	A	K	S	D	G	P	N	A	V	P	L
Template Known Secondary structure						.	.	.	.	.	.	.	.							G	G	G	G	S	S										T						T	T															S						.			S		T	T	T			T	T	S		S				G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																																																		.
Template SS confidence
		178	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	D	L	Q	L	F	R	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	M	G	A	L	L	E	T	L
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions