|   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | L | D | L | L | F | E | A | Q | Q | V | H | R | Q | H | F | D | P | R | Q | V | Q | V | S | T | L | L | S | I | K | T | G | A | C | P | E | D | C | K | Y | C | P | Q | S | S | R | Y | K | T | G | L | E | A | E | R | L | M | E | V | E | Q | V | L | E | S | A | R | K | A | K | A | A | G | S | T | R | F | C | M |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   | . |
|   |
|   |   |
|
Template Sequence |   |
G | A | R | E | A | L | D | L | L | V | E | A | I | A | K | A | G | Y | T | G | K | I | E | I | A | M | D | C | A | A | S | E | F | Y | N | E | E | T | K | K | Y | D | L | G | K | K | I | P | A | D | K | K | D | P | S | L | V | K | D | V | D | G | L | I | A | E | Y | V | D | Y | G | K | H | . |
Y | P | I | A | S | I |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T | T |
|  |  |  |  |  |
|
| G | G | G | G |  |  | T | T | T | T |  |  |  | T | T | T | T | S |
| G | G | G |
|
| G | G | G |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
290 | . | . | . | . | . |
  |
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | A | W | K | N | P | H | E | R | D | M | P | Y | L | E | Q | M | V | Q | G | V | K | A | M | G | L | E | A | C | M | T | L | G | T | L | S | E | S | Q | A | Q | R | L | A | N | A | G | . |
L | D | Y | Y | N | H | N | L | D | T | S | P | E | F | Y | G | N | I | I | T | T | R | T | Y | Q | E | R | L | D | T | L |
Query Conservation |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |
|   |   |
|
|   |
|
| . |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |
|
|
|   |   |   |   |
|   |   |
|   |
|   |
|   |   |   |   |   | . |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|
|   | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|
|
|   |   |   |   |
Template Sequence |   |
. |
. |
. |
E | D | P | F | A | E | D | D | W | A | A | W | N | K | F | T | V | E | H | G | . |
N | F | Q | I | V | G | D | D | L | L | V | T | N | P | A | R | V | Q | M | A | M | D | K | N | A | C | N | S | V | L | I | K | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | Q | I | G | T | L | T | E | T | F | K | T | I |
Template Known Secondary structure |   |
. | . | . |  |
|
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| T | . | T | S |  |  |  |  | S | T | T | T | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | |
. | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 350 | . | . | . | . | . | . | . | . | . | 360 | . |
  |
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
|
. | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | V | R | D | A | G | I | K | V | C | S | G | G | I | V | G | L | . |
. |
G | E | T | V | K | D | R | A | G | L | L |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |
|
| . | . |
|
|
|   |
|
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   | . | . | . | . |   |
|
|   |
|
|
|
|
|   |
|   |   |
|
|
|
|
Template Sequence |   |
K | M | A | Q | E | K | G | W | G | V | . |
. |
. |
. |
M | A | S | H | R | S | G | E | T | E | D | T | F | I | A | D | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|  |  | . | . | . | . |  |  |  |
|
| S | B |
|
| S |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
362 | . | . | . | . | . | . | . | 370 | . | |
|
|
|
. | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . |
  |