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Job DescriptionP12996
Confidence97.26%DateThu Jan 5 11:33:15 GMT 2012
Rank36Aligned Residues199
% Identity17%Templatec3qc3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MEVEQVLESARKAKAAGSTRFCM. GAAW. KNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQ. AQRLANAGLDYYNH
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Template Sequence  SDLANLGAECLRXLDSGADYLHLDVXDGHFVPNITFGHPVVESLRKQLGQDPFFDXHXXVSKPEQWVKPXAVAGANQYTF
Template Known Secondary structure  S
GGGTT
S
BSSSSS
B



SSS

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S
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   153......160.........170.........180.........190..... ....200.........210.........220.........230.
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Query Sequence  NLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL. GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTP
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Template Sequence  HLEATEN. . . . . . . . . . . . . PGALIKDIRENGXKV. . . . GLAIKPGTSVEYL. . . . . . APWANQIDXALVXTVEPGFGGQ
Template Known Secondary structure  GGG
S
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TTS
GGGG......TTTGGGSSSS
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   94.....100 .........110..... ....120........ .130.........140.........150
 
   232.......240.........250.........260.........270.........280.........290.........300........
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Query Sequence  LADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKL
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Template Sequence  . . . . . . KFXEDXXPKVHWLRTQFPSLDIEVDGGV. . . GPDTVHKCAEAGANXIVSG. SAIXRSE. DPRSVINLLRNV
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GGG
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   151........160.........170........ .180.........190....... ..200.... .....210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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