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Job DescriptionP12996
Confidence30.53%DateThu Jan 5 11:33:15 GMT 2012
Rank450Aligned Residues100
% Identity18%Templatec3q45E_
PDB info PDB header:isomeraseChain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100.........110.........120.........130.........140...... ...150.....
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Query Sequence  EVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAG. LDYYNHNLD
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Template Sequence  SVETAIETLTLLEPYNIQHC. . . . . EEPVSRNLYTALPKIRQA. . . CRIPIMADESCCNSFDAERLIQIQACDSFNLKL.
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GGG

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   196...200.........210..... ....220.........230... ......240.........250.........260......
 
   156...160.........170.........180.........190....
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Query Sequence  TSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVG
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Template Sequence  . . . . . . . . . SKSAGITNALNIIRLAEQAHMPVQVGGFLE
Template Known Secondary structure  .........TTTTSTT



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   267..270.........280.........290......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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