Job Description P12996 Confidence 39.69% Date Thu Jan 5 11:33:15 GMT 2012 Rank 392 Aligned Residues 106 % Identity 14% Template c3pjwA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23 Resolution 3.10 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	.	E	K	V	R	D	A	G	I	K	V
Query Conservation																																																																							.
Alig confidence																																																.	.	.	.																				.
Template Conservation																																																.	.	.	.
Template Sequence		E	Q	A	V	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	L	Q	R	F	G	G	R	F	S	M	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	.	.	.	.	S	Y	I	R	A	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L
Template Known Secondary structure																T	T										S		G	G	G	T	S	S							S						T	.	.	.	.	T	T	T	T	T	T	T	T																	T	T	T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.					.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	.	V	K	V	K
Query Conservation																																							.
Alig confidence		.	.	.	.														.	.	.	.							.	.									.
Template Conservation		.	.	.	.														.	.	.	.							.	.
Template Sequence		.	.	.	.	I	A	E	R	V	E	T	E	G	E	L	S	V	.	.	.	.	I	R	E	M	G	L	.	.	Y	G	V	Q	G	Q	L	F	G	E	P	K	P
Template Known Secondary structure		.	.	.	.							S							.	.	.	.			T	T	T		.	.	S				S	G	G	G				B
Template Predicted Secondary structure		.	.	.	.														.	.	.	.							.	.
Template SS confidence
						615	.	.	.	.	620	.	.	.	.	.	.	.					.	.	630	.	.	.			.	.	.	.	.	.	640	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions