Job Description P12996 Confidence 32.72% Date Thu Jan 5 11:33:15 GMT 2012 Rank 439 Aligned Residues 174 % Identity 13% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																						.	.																				.	.	.	.															.
Query SS confidence																						.	.																				.	.	.	.															.
Query Sequence		N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	.	.	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	.	.	.	.	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	.	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T
Query Conservation																						.	.																				.	.	.	.															.
Alig confidence																						.	.																				.	.	.	.															.		.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		G	L	P	N	L	G	I	N	Y	Y	L	D	Y	V	T	E	L	Q	K	Q	P	D	S	K	N	H	F	L	S	L	V	G	M	S	P	E	E	T	H	T	I	L	M	V	E	A	S	K	Y	Q	G	L	V	E	L	N	L	S	C	P	N	.	.	.	.	.	.	V	P	G	P	Q	I	A	Y	D	F	E	T	T
Template Known Secondary structure					B	S															S	T	T											S	S										T	T	T	S	S			S							S				.	.	.	.	.	.	S					G	G	G
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.												.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																					.																											.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence																					.																											.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	.	.	.	.	.	.	.	.	.	.	.	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	.
Query Conservation																					.																											.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence																					.																				.	.						.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																									.	.
Template Sequence		D	Q	I	L	S	E	V	F	T	Y	F	T	K	P	L	G	I	K	L	P	P	Y	F	D	I	V	H	F	D	Q	A	A	A	I	F	N	Y	P	L	.	.	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T	A
Template Known Secondary structure									T	T	T			S																											.	.	S																T	T						G	G	G							G	G	G
Template Predicted Secondary structure																																									.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G
Query Conservation
Alig confidence																									.								.
Template Conservation																									.								.
Template Sequence		L	A	N	V	H	A	F	Y	K	R	L	N	P	S	I	Q	I	I	G	T	G	G	V	.	T	G	R	D	A	F	E	.	H	I	L	C	G	A	S	M	V	Q	I	G
Template Known Secondary structure										T	T	S		T	T	S						S			.								.					T		S					S
Template Predicted Secondary structure																									.								.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions