Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence58.88%DateThu Jan 5 11:33:15 GMT 2012
Rank281Aligned Residues100
% Identity20%Templatec3obkH_
PDB info PDB header:lyaseChain: H: PDB Molecule:delta-aminolevulinic acid dehydratase; PDBTitle: crystal structure of delta-aminolevulinic acid dehydratase2 (porphobilinogen synthase) from toxoplasma gondii me49 in complex3 with the reaction product porphobilinogen
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100 .........110.........120......... 130...
Predicted Secondary structure 




..........











.............


Query SS confidence 























. . . . . . . . . .




























. . . . . . . . . . . . .



Query Sequence  EVEQVLESARKAKAAGSTRFCMGA. . . . . . . . . . AWKNPHERDMPYLEQMVQGVKAMGLEACM. . . . . . . . . . . . . TLGT
Query Conservation 
 


   
      
   
 


..........

        
 
 
 
  
      
  .............
 
 
Alig confidence 























..........









..
















.............



Template Conservation 
 
 
  

      

  
 



     

  

 
    
 ..
  


 

  

 
 
  




 








Template Sequence  SMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGL. . LPRAIMALKEAFPDVLLLADVALDPYSSMGHDGV
Template Known Secondary structure 
TT



GGG
BSS
GGGG
TTS..
TTS
STTTBSS

SS
Template Predicted Secondary structure 

























..











Template SS confidence 















































































   71........80.........90.........100.........110.... .....120.........130.........140........
 
   134.. ...140.........150.........160.........170.........180.........190..
Predicted Secondary structure 

...............
















Query SS confidence 


. . . . . . . . . . . . . . .























































Query Sequence  LSE. . . . . . . . . . . . . . . SQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGI
Query Conservation 
  ...............
 
  

 

        


      
        

  
  
   

 
  
 
Alig confidence 


...............












..............




























Template Conservation 
    
 



 

  


 


 
 




..............










 


  

  
   
 

Template Sequence  VDEQSGKIVNDLTVHQLCKQAITLARAGADM. . . . . . . . . . . . . . VCPSDMMDGRVSAIRESLDMEGCTDTSIL
Template Known Secondary structure  B
TTT

B
T
S..............
S

TTTT
TT
Template Predicted Secondary structure 











..............











Template SS confidence 









































































   149150.........160.........170......... 180.........190.........200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions