Job Description P12996 Confidence 72.32% Date Thu Jan 5 11:33:15 GMT 2012 Rank 204 Aligned Residues 59 % Identity 12% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.		.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.				.													.
Query SS confidence																			.	.	.	.	.	.	.				.													.
Query Sequence		S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	.	.	.	.	.	.	.	L	D	T	.	S	P	E	F	Y	G	N	I	I	T	T	R	.	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L
Query Conservation																			.	.	.	.	.	.	.				.													.
Alig confidence																			.	.	.	.	.	.	.				.													.
Template Conservation
Template Sequence		Q	K	L	D	Y	L	N	Q	L	G	V	K	A	L	W	L	S	P	I	H	P	C	X	S	Y	H	G	Y	D	V	T	D	Y	T	K	V	N	P	Q	L	G	T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K	I	Y	L	D	Y	V	X	N	H
Template Known Secondary structure		T	T							T	T		S								S		B	S	S	T	T			S	B	S		T	T	S			T	T	T																T	T										S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions