Job Description P12996 Confidence 32.67% Date Thu Jan 5 11:33:15 GMT 2012 Rank 440 Aligned Residues 223 % Identity 13% Template c3irsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein bb4693; PDBTitle: crystal structure of uncharacterized tim-barrel protein bb4693 from2 bordetella bronchiseptica Resolution 1.76 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																														.	.	.	.
Query SS confidence																																																														.	.	.	.
Query Sequence		E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	.	.	.	.	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H
Query Conservation																																																														.	.	.	.
Alig confidence														.	.	.																																														.	.	.	.
Template Conservation														.	.	.
Template Sequence		S	L	E	L	M	F	E	E	M	A	A	A	.	.	.	G	I	E	Q	G	V	C	V	G	R	N	S	S	V	L	G	S	V	S	N	A	D	V	A	A	V	A	K	A	Y	P	D	K	F	H	P	V	G	S	I	E	A	A	T	R	K	E	A	M	A	Q	M	Q	E	I	L	D	L	G	I	R	I	V	N	L
Template Known Secondary structure														.	.	.	T												T	T	T															S	T	T	T										S	S														T	T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L
Query Conservation
Alig confidence				.	.	.	.	.																																.	.																							.	.																.
Template Conservation				.	.	.	.	.																																.	.																							.	.																.
Template Sequence		E	P	.	.	.	.	.	G	V	W	A	T	P	M	H	V	D	D	R	R	L	Y	P	L	Y	A	F	C	E	D	N	G	I	P	V	I	M	M	.	.	T	G	G	N	A	G	P	D	I	T	Y	T	N	P	E	H	I	D	R	V	L	G	.	.	D	F	P	D	L	T	V	V	S	S	H	G	N	W	P	.
Template Known Secondary structure			G	.	.	.	.	.	G	G	S	S	S				T	T		G	G	G										T	T							.	.		S	S	S		S	S	S	G	G	G	G											.	.			T	T							G	G	G	T	T	.
Template Predicted Secondary structure				.	.	.	.	.																																.	.																							.	.																.
Template SS confidence
		123	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	.	.	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q	L	F	R	K	L	G	L
Query Conservation																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																												.	.																						.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	W	V	Q	E	I	I	H	V	A	F	R	R	P	N	L	Y	L	S	P	D	M	Y	L	Y	N	L	P	G	H	A	D	F	I	Q	A	A	N	S	F	L	A	D	R	M	L	F	G	T	A	Y	.	.	.	P	M	C	P	L	K	E	Y	T	E	W	F	L	T	L	P	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.													T	T						G	G	G	G	S	S	S	T	T									T	T	T	T	T	T	T	B						B	.	.	.	T	S	S											T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Template SS confidence
												193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	Q	Q	T	A	V	L	A	G	D	N	E	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	D	A	M	E	K	I	L	H	G	N	A	E	R
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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