Job Description P12996 Confidence 90.92% Date Thu Jan 5 11:33:15 GMT 2012 Rank 110 Aligned Residues 244 % Identity 12% Template c3hpxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of mycobacterium tuberculosis leua active site2 domain 1-425 (truncation mutant delta:426-644) Resolution 2.03 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	P	Q	S	S	R	Y	K	T	G	L	E	A	E	R	L	M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q
Query Conservation
Alig confidence																		.																								.	.
Template Conservation																		.																								.	.
Template Sequence		W	C	A	V	D	L	R	D	G	N	Q	A	L	I	D	P	.	M	S	P	A	R	K	R	R	M	F	D	L	L	V	R	M	G	Y	K	E	I	E	V	.	.	G	F	P	S	A	S	Q	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P	D	D	V	T	I	Q	V	L	T	Q	C	R	P	E	L
Template Known Secondary structure											G	G	G		S	S		.																	T		S					.	.			T	T	T														T	T		S		T	T									S
Template Predicted Secondary structure																		.																								.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
						139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.								.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.	.	.																															.	.	.																.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																															.	.	.																.	.	.	.	.	.	.
Query Sequence		.	.	.	.	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	.	.	.	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	.	.	.	.	.	.	.	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G
Query Conservation		.	.	.	.																															.	.	.																.	.	.	.	.	.	.
Alig confidence		.	.	.	.																															.	.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	R	T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y	S	P	E	S	Y	T	G	T	E	L	E	Y	A	K	Q
Template Known Secondary structure									T	T	T		S																		T	T																									S	T	T	S										T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	.	.	.	.	.	Q	A	M	C	F	M	A
Query Conservation																																																																						.	.	.	.	.
Alig confidence												.	.															.	.	.	.																									.														.	.	.	.	.
Template Conservation												.	.															.	.	.	.																									.
Template Sequence		V	C	D	A	V	G	E	V	I	A	.	.	P	T	P	E	R	P	I	I	F	N	L	P	A	T	.	.	.	.	V	E	M	T	T	P	N	V	Y	A	D	S	I	E	W	M	S	R	N	L	A	N	R	E	.	S	V	I	L	S	L	H	P	H	N	D	R	G	T	A	V	A	A	A	E	L	G	F	A	A
Template Known Secondary structure												.	.			S	S	S									S	.	.	.	.	S			S																S	T	T	G	G	.	G								B		T	T	S												T
Template Predicted Secondary structure												.	.															.	.	.	.																									.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		G	A	N	.	.	.	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q	L	F	R	K	L	G	L	N	P	Q
Query Conservation					.	.	.
Alig confidence					.	.	.						.
Template Conservation													.
Template Sequence		G	A	D	R	I	E	G	C	L	F	G	.	N	G	E	R	T	G	N	V	C	L	V	T	L	G	L	N	L	F	S	R	G	V	D	P	Q
Template Known Secondary structure		T							B	G	G	G	.		S	S	T	T		B		B										T	T	T				S
Template Predicted Secondary structure													.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions