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Job DescriptionP12996
Confidence49.54%DateThu Jan 5 11:33:15 GMT 2012
Rank331Aligned Residues182
% Identity20%Templatec3f55A_
PDB info PDB header:hydrolase, allergenChain: A: PDB Molecule:beta-1,3-glucanase; PDBTitle: crystal structure of the native endo beta-1,3-glucanase (hev b 2), a2 major allergen from hevea brasiliensis (space group p41)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100.........110.........120.........130.... .....140........
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Query Sequence  LMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTL. . . . . . SESQAQRLANAGLD
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Template Sequence  LPPVSEV. . . IALYKKSNITRMRIYDPN. . . . . . . . . . . QAVLEALRGSNIELILGVPNSDLQSLTNPSNAKSWVQKNVR
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   13...... 20.........30....... ..40.........50.........60.........70........
 
   149150 ...... ...160.........170.........180.. .......190..... ... .200.
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Query Sequence  YY. . . . . NHNLDT. SPEFYGNIITTRTYQERLDTLEKVRD. . . . . . . . AGIKVCSGGIVGL. GET. . . . . . . . . . . . VKD
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Template Sequence  GFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSY
Template Known Secondary structure  TTTTTTTS

SSSTTTTTTT
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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   202.......210.........220.... .....230.........240.........250.........260
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Query Sequence  RAGLLLQLANLPTPPESVPINML. . . . . . . . . . . . . . . . . . . . . VKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVR
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Template Sequence  LNPIIRFLSSIRS. PLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVV
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   159160.........170. ........180.........190.........200.........210.........220.........230.......
 
   261. .......270.
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Query Sequence  LS. AGREQMNEQ
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Template Sequence  VSESGWPSAGAF
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   238.240.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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