Job Description P12996 Confidence 97.82% Date Thu Jan 5 11:33:15 GMT 2012 Rank 25 Aligned Residues 221 % Identity 11% Template c3eegB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii Resolution 2.78 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	.	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L
Query Conservation																																																														.
Alig confidence																									.	.																																				.
Template Conservation																									.	.
Template Sequence		L	N	T	E	E	K	I	I	V	A	K	A	L	D	E	L	G	V	D	V	I	E	A	.	.	G	F	P	V	S	S	P	G	D	F	N	S	V	V	E	I	T	K	A	V	T	R	P	T	I	C	A	L	T	R	A	K	E	A	D	I	N	I	A	G	E	A	L	R	F	A	K	R	S	R	I	H	T	G	I
Template Known Secondary structure																T	T	T		S					.	.			T	T	T													T	T			S	S								S													T	T		S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		155	.	.		.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure					.												.	.
Query SS confidence					.												.	.
Query Sequence		D	T	S	.	P	E	F	Y	G	N	I	I	T	T	R	.	.	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P
Query Conservation					.												.	.
Alig confidence					.												.	.																																															.	.					.	.	.	.	.	.					.
Template Conservation																																																																	.	.					.	.	.	.	.	.					.
Template Sequence		G	S	S	D	I	H	I	E	H	K	L	R	S	T	R	E	N	I	L	E	X	A	V	A	A	V	K	Q	A	K	K	V	V	H	E	V	E	F	F	C	E	D	A	G	R	A	D	Q	A	F	L	A	R	X	V	E	A	V	I	E	A	G	A	.	.	D	V	V	N	.	.	.	.	.	.	I	P	D	T	.
Template Known Secondary structure				S							T	S	T	T			T	T	T	T														S	S								S	T	T	T	S														T	T	T		.	.	S				.	.	.	.	.	.				S	.
Template Predicted Secondary structure																																																																	.	.					.	.	.	.	.	.					.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.							.	.	170	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																											.	.	.	.	.																											.	.	.
Query SS confidence																											.	.	.	.	.																											.	.	.
Query Sequence		L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	.	.	.	.	.	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	.	.	.	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q
Query Conservation																											.	.	.	.	.																											.	.	.
Alig confidence		.	.	.																							.	.	.	.	.										.																	.	.	.						.
Template Conservation		.	.	.																																					.																									.
Template Sequence		.	.	.	T	G	Y	X	L	P	W	Q	Y	G	E	R	I	K	Y	L	X	D	N	V	S	N	I	D	K	A	I	L	S	A	H	C	H	N	D	L	.	G	L	A	T	A	N	S	L	A	A	L	Q	N	G	A	R	Q	V	E	C	T	I	N	G	.	I	G	E	R	A	G	N	T	A	L	E	E	V	V	X
Template Known Secondary structure		.	.	.	S	S																			T	T	G	G	G	S							B		S	S	.	S											T	T	T							B	G	G	G	.			S	T	T		B		B
Template Predicted Secondary structure		.	.	.																																					.																									.
Template SS confidence
					172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		304					.	.	.	.	.	310	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		L	.	.	.	.	F	R	K	L	G	L	N	P
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		A	X	E	C	H	K	E	T	L	G	L	E	T
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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