Job Description P12996 Confidence 60.19% Date Thu Jan 5 11:33:15 GMT 2012 Rank 272 Aligned Residues 155 % Identity 14% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T
Query Conservation																																																														.
Alig confidence																												.	.	.	.	.	.																				.									.
Template Conservation																												.	.	.	.	.	.																				.
Template Sequence		G	R	L	C	D	D	L	I	Q	A	G	V	H	G	L	T	P	L	G	S	T	G	E	F	A	Y	.	.	.	.	.	.	L	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	.	R	V	P	V	V	A	G	V	A	S	T	S	V	A	D	A	V	A	Q	A	K	L	Y	E	K	L	G	A
Template Known Secondary structure											T	T		S		B	B	T	T	S	G	G	G	T	G	G	G	.	.	.	.	.	.																		T	T	.	S	S		B							S	S															T
Template Predicted Secondary structure																												.	.	.	.	.	.																				.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		215	.	.	.	.	220	.	.	.	.	.	.	.	.																							.	230	.	.	.	.	.	.	.	.	.	240	.	.																				.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	E	S	V	P	I	N	M	L	V	K	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	P	L	A	D	N	D	D	V	D	A	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	R	T	I	A	V	A	R	I	M
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	I	L	A	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L	A	E	H	P	R	I	R	Y	I	K	D	A	S	T	N	T	G	R	L	L	S	I	I	N	R	C
Template Known Secondary structure		S									S	S																			S	S								T	T	T		S	S												T	S	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q	L	F	R	K	L
Query Conservation
Alig confidence											.	.	.	.	.	.																				.	.	.	.	.
Template Conservation											.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		G	D	A	L	Q	V	F	S	A	.	.	.	.	.	.	S	A	H	I	P	A	A	V	M	L	I	G	G	V	G	W	M	A	G	.	.	.	.	.	P	A	C	I	A	P	R	Q	S	V	A	L	Y	E	L	C
Template Known Secondary structure		G	G	G	S						.	.	.	.	.	.	T	T	S								T	T							G	.	.	.	.	.	G	G	G	T
Template Predicted Secondary structure											.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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