Job Description P12996 Confidence 57.01% Date Thu Jan 5 11:33:15 GMT 2012 Rank 294 Aligned Residues 154 % Identity 20% Template c3daqB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus Resolution 1.45 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T
Query Conservation																																																														.
Alig confidence																												.	.	.	.	.	.																				.									.
Template Conservation																												.	.	.	.	.	.																				.
Template Sequence		K	A	H	V	N	F	L	L	E	N	N	A	Q	A	I	I	V	N	G	T	T	A	E	S	P	T	.	.	.	.	.	.	L	T	T	D	E	K	E	L	I	L	K	T	V	I	D	L	V	D	K	.	R	V	P	V	I	A	G	T	G	T	N	D	T	E	K	S	I	Q	A	S	I	Q	A	K	A	L	G	A
Template Known Secondary structure											T	T							S	S	G	G	G	T	G	G	G	.	.	.	.	.	.	S																	T	T	.	S	S									S																T
Template Predicted Secondary structure																												.	.	.	.	.	.																				.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.																							.	230	.	.	.	.	.	.	.	.	.	240	.	.																				.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	E	S	V	P	I	N	M	L	V	K	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	P	L	A	D	N	D	D	V	D	A	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	R	T	I	A	V	A	R	I	M
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	I	M	L	I	T	P	Y	Y	N	K	T	N	Q	R	G	L	V	K	H	F	E	A	I	A	D	A	V	K	L	P	V	V	L	Y	N	V	P	S	R	T	N	M	T	I	E	P	E	T	V	E	I	L	S	Q	H	P	Y	I	V	A	L	K	D	A	T	N	D	F	E	Y	L	E	E	V	K	K	R	I
Template Known Secondary structure		S									S	S																				S												S													T	S	T	T																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q	L	F	R
Query Conservation
Alig confidence												.	.	.	.	.																				.	.	.	.	.
Template Conservation												.	.	.	.	.																				.	.	.	.	.
Template Sequence		D	T	N	S	F	A	L	Y	S	G	.	.	.	.	.	N	D	D	N	V	V	E	Y	Y	Q	R	G	G	Q	G	V	I	S	V	.	.	.	.	.	I	A	N	V	I	P	K	E	F	Q	A	L	Y	D
Template Known Secondary structure			T	T	T	S					S	.	.	.	.	.		G	G	G							T	T							S	.	.	.	.	.	G	G	G	T
Template Predicted Secondary structure												.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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