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Job DescriptionP12996
Confidence92.65%DateThu Jan 5 11:33:15 GMT 2012
Rank96Aligned Residues202
% Identity12%Templatec3cu2A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90........ .100.........110.........120.........130........ .140.........150....
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Query Sequence  EVEQVLESARKAKAAGSTRFCM. GAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQ. AQRLANAGLDYYNHNL
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Template Sequence  NWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVG. . AIGIKYFP. THCFKDVHLXVRNQLEVAKAVVANGANLVTLQL
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GGGTT

BSSSSS
B
B
..TTS
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S
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   23......30.........40.........50........ .60...... ...70.........80.........90.........
 
   155....160.........170.........180.........190..... ....200.........210.........220.........230.
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Query Sequence  DTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL. . . GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTP
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Template Sequence  EQY. . . . . . . . . . HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP. . . . . . ISELEPYLDQIDVIQLLTLDPRNG. .
Template Known Secondary structure  T
T..........TSTT
TT

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......GGGGTTTTTT
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   100.. .......110.........120.........130....... ..140.........150.........160.
 
   232.......240.........250... ......260.........270.........280. ........290.........300......
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Query Sequence  LADNDDVDAFDFIRTIAVARIM. . . MPTSYVRLSAGREQMNEQTQAMCFMAGA. . NSIFYGCKLLTTPNPEEDKDLQLFR
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Template Sequence  . . . TKYPSELILDRVIQVEKRLGNRRVEKLINIDGS. . . XTLELAKYFKQGTHQIDWLVSG. SALF. . SGELKTNLKVWK
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GGGGGG
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   162.......170.........180.........190.... .....200.........210...... ...220 .........230..
 
   307.
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Query Sequence  KL
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Template Sequence  SS
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   233.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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