Job Description P12996 Confidence 100.00% Date Thu Jan 5 11:33:15 GMT 2012 Rank 3 Aligned Residues 307 % Identity 21% Template c3cixA_ PDB info PDB header:adomet binding protein Chain: A: PDB Molecule:fefe-hydrogenase maturase; PDBTitle: x-ray structure of the [fefe]-hydrogenase maturase hyde from2 thermotoga maritima in complex with thiocyanate Resolution 1.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		P	R	W	T	L	S	Q	V	T	E	L	F	E	K	P	L	.	.	.	L	D	L	L	F	E	A	Q	Q	V	H	R	Q	H	F	D	P	R	Q	V	Q	V	S	T	L	L	S	I	K	T	G	A	C	P	E	D	C	K	Y	C	P	Q	S	S	R	Y	K	T	G	L	E	A	E	R	L	M	E	V	E	Q	V
Query Conservation																		.	.	.
Alig confidence																		.	.	.																													.																				.	.
Template Conservation																																																	.																				.	.
Template Sequence		R	E	F	T	R	E	V	L	K	E	A	L	S	I	N	D	R	G	F	N	E	A	L	F	K	L	A	D	E	I	R	R	K	Y	V	G	D	E	V	H	I	R	A	I	I	E	F	.	S	N	V	C	R	K	N	C	L	Y	C	G	L	R	R	D	N	K	N	.	.	L	K	R	Y	R	M	T	P	E	E	I
Template Known Secondary structure		T																																				S											.					S				T	T		T	T		T	T			S	.	.	S				B
Template Predicted Secondary structure																																																	.																				.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	.	S	P	E	F
Query Conservation																																																																													.
Alig confidence																				.	.																																																								.
Template Conservation																				.	.
Template Sequence		V	E	R	A	R	L	A	V	Q	F	G	A	K	T	I	V	L	Q	.	.	S	G	E	D	P	Y	Y	M	P	D	V	I	S	D	I	V	K	E	I	K	K	M	G	V	A	V	T	L	S	L	G	E	W	P	R	E	Y	Y	E	K	W	K	E	A	G	A	D	R	Y	L	L	R	H	E	T	A	N	P	V	L
Template Known Secondary structure											T	T		S						.	.		S			G	G	G	T	T												T	T	S																					T	T									B		S
Template Predicted Secondary structure																				.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D
Query Conservation																																					.
Alig confidence																				.																	.																				.	.
Template Conservation																				.																																					.	.
Template Sequence		H	R	K	L	R	P	D	T	S	F	E	N	R	L	N	L	L	T	.	L	K	E	L	G	Y	E	T	G	A	G	S	M	V	G	L	P	G	Q	T	I	D	D	L	V	D	D	L	L	F	L	K	E	H	D	F	.	.	D	M	V	G	I	G	P	F	I	P	H	P	D	T	P	L	A	N	E	K	K	G	D
Template Known Secondary structure							T	T												.				T	T							B			S		T	T																	T		.	.	S											T	T	S	T	T	T	T	S
Template Predicted Secondary structure																				.																																					.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.									.	.	.	290	.	.	.	.	.	.	.	.	.	300	.										.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	.	.	.	.	.	.	.	.	G	C	K	L	L	T	T	P	N	P	E	E	D	K	D	.	.	.	.	.	.	.	.	.	L
Query Conservation																																																	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.		.														.	.	.	.	.	.	.	.	.
Template Conservation																																																										.
Template Sequence		F	T	L	T	L	K	M	V	A	L	T	R	I	L	L	P	D	S	N	I	P	A	T	T	A	M	G	T	I	V	P	G	G	R	E	I	T	L	R	C	G	A	N	V	I	M	P	N	W	T	P	S	P	Y	R	Q	.	L	Y	Q	L	Y	P	G	K	I	C	V	F	E	K	D	T	A	C	I	P	C	V	M
Template Known Secondary structure																S	T	T	S	B		B									S	T	T							T	T	T							B				T	T	T	G	G	.	G			S	S	S	S		T	T	T	T	S		T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	F	R	K	L	G	L	N	P	Q	Q	T	A	V	L	A	G	D
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		K	M	I	E	L	L	G	R	K	P	G	R	.	D	W	G	G	R	K
Template Known Secondary structure							T	T					S	.	S
Template Predicted Secondary structure														.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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