Job Description P12996 Confidence 94.64% Date Thu Jan 5 11:33:15 GMT 2012 Rank 79 Aligned Residues 213 % Identity 14% Template c3bg3B_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase, mitochondrial; PDBTitle: crystal structure of human pyruvate carboxylase (missing2 the biotin carboxylase domain at the n-terminus) Resolution 2.80 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.											.
Predicted Secondary structure																																.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	.	.	.	.	.	.	.	.	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	.	.	.	.	.	.	.	.	.	.	S
Query Conservation																																.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	T	H	D	L	K	K	I	A	P	Y	V	A	H	N	F	S	K	L	F	S	M	E	N	W	G	G	A	T	F	D	V	A	M	R	F	L	Y	E	C	P	W	R	R	L	Q	E	L	R	E	L	I	P	N	I	P	F	Q	M	L	L	R	G	A	N	A	V	G	Y	T	N	Y	P	D	N	V	V	F	K
Template Known Secondary structure										T									T	T		S							T	T								T	S																S	S	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.									.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.
Query Sequence		Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	.	.	.	.	.	.	.	.	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L
Query Conservation																																																										.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	C	E	V	A	K	E	N	G	M	D	V	F	R	V	F	D	S	L	N	Y	.	.	.	.	.	.	.	.	.	.	.	L	P	N	M	L	L	G	M	E	A	A	G	S	A	G	G	V	V	E	A	A	I	S	Y	T	G	D	V	A	D	P	S	R	T	K	Y	S	L	Q	Y	Y	M	G	L	A	E	E	L
Template Known Secondary structure								T	T	T									T	T			.	.	.	.	.	.	.	.	.	.	.															T											S		T	T		T	T			S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.												.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	.	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C
Query Conservation																																																												.
Alig confidence							.	.						.	.	.	.	.	.	.			.	.	.	.																																		.
Template Conservation							.	.						.	.	.	.	.	.	.			.	.	.	.
Template Sequence		V	R	A	G	T	.	.	H	I	L	C	I	.	.	.	.	.	.	.	D	M	.	.	.	.	A	G	L	L	K	P	T	A	C	T	M	L	V	S	S	L	R	D	R	F	P	D	L	P	L	H	I	H	T	H	D	T	S	G	A	G	V	A	A	M	L	A	C	A	Q	A	G	A	D	V	V	D	V	A	A
Template Known Secondary structure					T		.	.	S					.	.	.	.	.	.	.		T	.	.	.	.	T																	T	T		T	T	S									T	T	S												T	T		S					B
Template Predicted Secondary structure							.	.						.	.	.	.	.	.	.			.	.	.	.
Template SS confidence
		731	.	.	.	.			.	.	.	.	740								.	.					.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.
		289	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		K	L	L	T	.	.	T	P	N	P	E	E	D	K	D	L	Q	L	F	R	K	L	G	L	N	P
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		D	S	M	S	G	M	T	S	Q	P	S	M	G	A	L	V	A	C	T	R	G	T	P	L	D	T
Template Known Secondary structure		G	G	G		S	T	T	S			B							T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		799	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions