Job Description P12996 Confidence 96.11% Date Thu Jan 5 11:33:15 GMT 2012 Rank 59 Aligned Residues 201 % Identity 10% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	Q	S	S	R	Y	K	T	G	L	E	A	E	R	L	M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A
Query Conservation
Alig confidence																.	.	.																							.	.	.																							.				.
Template Conservation																.	.	.																							.	.	.																							.				.
Template Sequence		S	T	L	R	E	G	E	Q	F	E	K	A	N	F	.	.	.	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	.	.	.	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	.	A	K	V	.	V	T	H	I	Q	C	R	L	D	A	A
Template Known Secondary structure					T	G	G	G	G	S	T	T				.	.	.																T		S					.	.	.			G	G	G														S			S	.	S			.						S
Template Predicted Secondary structure																.	.	.																							.	.	.																							.				.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.		70	.	.	.	.	.	.	.	.	.	80
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S
Query Conservation																																																										.
Alig confidence																							.	.	.	.																																.																				.	.
Template Conservation																							.	.	.	.																																																				.	.
Template Sequence		K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	.	.	.	.	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	.	.	D	R
Template Known Secondary structure							T	T		S								S					.	.	.	.																					T	T	S							S	S	T	T	T	S													G	G	G		.	.	S
Template Predicted Secondary structure																							.	.	.	.																																																				.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																						.														.
Query SS confidence																																						.														.
Query Sequence		V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	.	P	T	S	Y	V	R	L	S	A	G	R	E	Q	.	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I
Query Conservation																																						.														.
Alig confidence				.	.	.	.	.	.					.	.	.	.																					.														.
Template Conservation				.	.	.	.	.	.					.	.	.	.
Template Sequence		V	G	.	.	.	.	.	.	L	A	D	T	.	.	.	.	V	G	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	E	A	I	E	A	G	A	T	H	V
Template Known Secondary structure				.	.	.	.	.	.				T	.	.	.	.	T	S																			T	T	T	S							B		T	T	S												T	T
Template Predicted Secondary structure				.	.	.	.	.	.					.	.	.	.
Template SS confidence
		161	.							.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions