Job Description P12996 Confidence 72.75% Date Thu Jan 5 11:33:15 GMT 2012 Rank 201 Aligned Residues 86 % Identity 12% Template c2vc6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T
Query Conservation																																																														.
Alig confidence																												.	.	.	.	.	.																				.									.
Template Conservation																												.	.	.	.	.	.																				.
Template Sequence		H	D	L	V	E	W	Q	I	E	E	G	S	F	G	L	V	P	C	G	T	T	G	E	S	P	T	.	.	.	.	.	.	L	S	K	S	E	H	E	Q	V	V	E	I	T	I	K	T	A	N	G	.	R	V	P	V	I	A	G	A	G	S	N	S	T	A	E	A	I	A	F	V	R	H	A	Q	N	A	G	A
Template Known Secondary structure											T	T		S				T	T	S	G	G	G	T	G	G	G	.	.	.	.	.	.	S																	T	T	.	S	S		B							S	S														T	T
Template Predicted Secondary structure																												.	.	.	.	.	.																				.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	E	S	V	P	I	N	M	L	V	K	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	V	L	I	V	S	P	Y	Y	N	K	P	T
Template Known Secondary structure		S									S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions