Job Description P12996 Confidence 96.61% Date Thu Jan 5 11:33:15 GMT 2012 Rank 50 Aligned Residues 212 % Identity 13% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.											130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	.	.	.	.	.	.	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	.	.	.	.	.	.	.	.	.	.	T	L	G	T	L	S	E	S	Q	A
Query Conservation																															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	I	D	D	M	L	P	I	A	Q	Q	L	D	Q	I	G	Y	W	S	L	E	C	W	G	G	A	T	F	D	S	C	I	R	F	L	G	E	D	P	W	Q	R	L	R	L	L	K	Q	A	M	P	N	T	P	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	A	D	D	V	V	D	T	F	V
Template Known Secondary structure								T	T	T						T	S			S							T	T									T																T	T	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	.	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E
Query Conservation																																																										.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																.	.																				.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Template Sequence		E	R	A	V	K	N	G	M	D	V	F	R	V	F	.	.	.	.	.	.	.	.	.	.	.	D	A	M	N	D	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	G	A	H	A	Q	G	T	L	C	Y	T	T	S	P	V	H	N	L	Q	T	W	V	D	V	A	Q	Q	L	A	E	L	G	V	.	.	D
Template Known Secondary structure								T								.	.	.	.	.	.	.	.	.	.	.		T	T																	T													T	T																T	T		.	.	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120												.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																				.																.	.	.
Query SS confidence																																																				.																.	.	.
Query Sequence		S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	.	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	.	.	.	S	I	F	Y	G	C	K	L	L	T	T
Query Conservation																																																				.																.	.	.
Alig confidence					.	.	.	.	.	.					.	.	.	.																				.														.																.	.	.						.
Template Conservation					.	.	.	.	.	.					.	.	.	.																				.																																						.
Template Sequence		S	I	A	.	.	.	.	.	.	L	K	D	M	.	.	.	.	A	G	I	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	.	V	D	V	E	L	H	L	H	C	H	S	T	A	G	L	A	D	M	T	L	L	K	A	I	E	A	G	V	D	R	V	D	T	A	I	S	S	.	M	S	G	T	Y
Template Known Secondary structure					.	.	.	.	.	.				S	.	.	.	.	S	S																		.	S		S									T	T	S												T	T		S					B		G	G	.	G		S	T	T
Template Predicted Secondary structure					.	.	.	.	.	.					.	.	.	.																				.																																						.
Template SS confidence
		174	.	.							.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	P	E	E	D	K	D	L	Q	L	F	R	K	L	G	L	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	P	A	T	E	S	L	V	A	T	L	Q	G	T	G	Y	D	T
Template Known Secondary structure		S			B									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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