Job Description P12996 Confidence 73.30% Date Thu Jan 5 11:33:15 GMT 2012 Rank 196 Aligned Residues 146 % Identity 12% Template c2jgqB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori Resolution 2.3 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		A	Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																						.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																						.	.	.	.
Template Sequence		S	K	H	L	E	E	L	K	I	H	T	L	L	I	G	H	S	E	R	R	T	L	L	.	.	.	.	.	K	E	S	P	S	F	L	K	E	K	F	D	F	F	K	S	K	N	F	K	I	.	.	.	.	V	Y	C	I	G	E	E	L	T	T	R	E	K	G	F	K	A	V	K	E	F	L	S	E	Q	L	E
Template Known Secondary structure								T	T														T	S	.	.	.	.	.																	T	T				.	.	.	.																											T
Template Predicted Secondary structure																									.	.	.	.	.																						.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
					212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C
Query Conservation		.	.	.
Alig confidence		.	.	.																	.				.	.	.	.	.	.																																	.																		.
Template Conservation																					.				.	.	.	.	.	.																																	.																		.
Template Sequence		N	I	D	L	N	Y	P	N	L	V	V	A	Y	E	P	I	W	A	I	.	G	T	S	.	.	.	.	.	.	A	S	L	E	D	I	Y	L	T	H	G	F	L	K	Q	I	L	N	Q	K	T	P	L	L	Y	G	G	S	V	N	T	Q	.	N	A	K	E	I	L	G	I	D	S	V	D	G	L	L	I	G	.
Template Known Secondary structure		T	S		T	T		T	T								G	G	G	T	.	T			.	.	.	.	.	.														T	T	T	S		T	T	S						S	S			T	T	.	T						T	S	T	T								.
Template Predicted Secondary structure																					.				.	.	.	.	.	.																																	.																		.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q	L	F	R
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	S	A	S	W	E	L	E	N	F	K	T	I	I	S
Template Known Secondary structure		.	.	.	.	G	G	G	G	S									T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						219	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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