Job Description P12996 Confidence 40.31% Date Thu Jan 5 11:33:15 GMT 2012 Rank 388 Aligned Residues 204 % Identity 11% Template c2hmcA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: the crystal structure of dihydrodipicolinate synthase dapa from2 agrobacterium tumefaciens Resolution 1.90 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		T	G	L	E	A	E	R	L	M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	.	.	.	.	E	S	Q	A	Q	R	L	A
Query Conservation																																																																						.	.	.	.
Alig confidence																																																																						.	.	.	.
Template Conservation
Template Sequence		T	P	C	R	Q	D	R	T	P	D	F	D	A	L	V	R	K	G	K	E	L	I	A	D	G	X	S	A	V	V	Y	C	G	S	X	G	D	W	P	L	L	T	D	E	Q	R	X	E	G	V	E	R	L	V	K	A	G	I	P	V	I	V	G	T	G	A	V	N	T	A	S	A	V	A	H	A	V	H	A	Q
Template Known Secondary structure				B		T	T	S	S	B															T	T							S	S	G	G	G	T	G	G	G	S															T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																									.	.														.
Query SS confidence																																									.	.														.
Query Sequence		N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	.	.	A	G	I	K	V	C	S	G	G	I	V	G	L	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P
Query Conservation																																									.	.														.
Alig confidence													.	.	.	.	.	.	.																						.	.														.									.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.																																														.	.	.	.	.
Template Sequence		K	V	G	A	K	G	L	X	V	I	P	.	.	.	.	.	.	.	R	V	L	S	R	G	S	V	I	A	A	Q	K	A	H	F	K	A	I	L	S	A	A	P	E	I	P	A	V	I	Y	N	S	P	Y	Y	G	F	A	T	R	A	D	L	F	.	.	.	.	.	F	A	L	R	A	E	H	K	N	L	V	G
Template Known Secondary structure				T		S							.	.	.	.	.	.	.			S	S	S	T	T																S	T	T	S							B	G	G	G	T	B								.	.	.	.	.								T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.																																														.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																				.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																				.	.	.	.	.
Template Sequence		F	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	F	G	G	P	A	D	X	R	Y	A	A	E	N	I	T	S	R	D	D	E	V	T	L	X	I	G	V	.	.	.	.	.	D	T	A	V	V	H	G	F	V	N	C	G	A	T	G	A	I	T	G	.	.	.	.	.	I	G	N	V	L	P	K	E
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.				S												T	S		S	S	S	S							S	.	.	.	.	.	G	G	G								S								S	.	.	.	.	.	G	G	G	T	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		163														.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.
		301	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Q	L	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	H	L	C	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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