Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence51.97%DateThu Jan 5 11:33:15 GMT 2012
Rank315Aligned Residues133
% Identity7%Templatec2h9aB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:co dehydrogenase/acetyl-coa synthase, iron- PDBTitle: corrinoid iron-sulfur protein
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100..... ....110.........120.........130.........140........
Predicted Secondary structure 








......














...
Query SS confidence 



























. . . . . .










































. . .
Query Sequence  VEQVLESARKAKAAGSTRFCMGAAWKNP. . . . . . HERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLD. . .
Query Conservation   


   
      
   
 




   ......     
 
 
 
  
      
  
 
 
  
 
  

 

  ...
Alig confidence 



























......










































...
Template Conservation         

  
  







 





   

 


  

  
  

  

 
   
 

    
 
 

 
      
Template Sequence  INDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNC
Template Known Secondary structure  TT
TT
S
GGG
TTTT



SS


S
TTTS

Template Predicted Secondary structure 




































Template SS confidence 















































































   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   149150.........160.... .....170.........180..... ....190.... .....200.........210
Predicted Secondary structure  .





.........







...
.



Query SS confidence  .















. . . . . . . . .




















. . .








.















Query Sequence  . YYNHNLDTSPEFYGNI. . . . . . . . . ITTRTYQERLDTLEKVRDAGI. . . KVCSGGIVG. LGETVKDRAGLLLQLA
Query Conservation  .      


      
.........        

  
  
   

... 
  
 
 
.



 

    
  

Alig confidence  .















.........




















...








.















Template Conservation 

          
   
      

 

         
       

    







  

  
        

Template Sequence  LLSSATKDNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIMEMNLAPNRIIMDPLIGALGYGIEYSYSIIERMR
Template Known Secondary structure 
TTTT

SS
TTT

GGG




TTTT
Template Predicted Secondary structure 































Template SS confidence 











































































   153......160.........170.........180.........190.........200.........210.........220........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions