Job Description P12996 Confidence 94.41% Date Thu Jan 5 11:33:15 GMT 2012 Rank 84 Aligned Residues 203 % Identity 18% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	.	.	.	.	.	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y	Y	N
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.																									.	.													.
Template Conservation																																																														.	.													.
Template Sequence		S	R	E	Q	I	M	K	V	A	E	F	L	A	E	V	G	I	K	V	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	Y	G	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	G	L	V	T	V	T	E	V	.	.	M	D	T	R	H	V	E	L	V	A	K	Y	.	S	D	I	L	Q
Template Known Secondary structure																T	T							B	S	S				S	S	T	T	S					T															T								.	.			G	G	G								.		S
Template Predicted Secondary structure																																																														.	.													.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	.	.	L	V	K	V	K	G
Query Conservation																																																																										.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																										.	.								.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																										.	.
Template Sequence		I	G	A	R	N	S	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	L	L	K	E	V	G	K	V	E	N	P	V	.	.	L	L	K	R	G	M	G	N	T	I	Q	E	L	L	Y	S	A	E	Y	I	M	A	Q	G	N	.	.	E	N	V	I	L	C	E	R	G	I	R	T	F	E	T
Template Known Secondary structure				G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	S	S			.	.						T	T															T	T	T		.	.										B			S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																										.	.
Template SS confidence
		112	.	.	.	.	.	.	.															120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.									.	.
Predicted Secondary structure																																	.	.	.																																					.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.																																					.	.	.	.	.	.	.	.
Query Sequence		T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	.	.	.	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	.	.	.	.	.	.	.	.	E	E
Query Conservation																																	.	.	.																																					.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																	.	.	.																												.									.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.																																															.
Template Sequence		A	T	R	F	T	L	D	I	.	.	.	.	.	.	.	S	A	V	P	V	V	K	E	L	S	H	L	P	I	I	V	D	P	S	H	P	A	G	R	R	S	L	V	I	P	L	A	K	A	A	Y	A	I	G	A	D	G	I	M	V	E	.	V	H	P	E	P	E	K	A	L	S	D	S	Q	Q	Q	L	T	F
Template Known Secondary structure		S	S	S	S	B			T	.	.	.	.	.	.	.	T									B	S	S						S	S	T	T	T		S	G	G	G											T	T		S						.	B		S	S	G	G	G		S	S		T	T	T		B
Template Predicted Secondary structure										.	.	.	.	.	.	.																																															.
Template SS confidence
		174	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	D	L	Q	L	F	R	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	F	L	Q	L	L	K	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions