Job Description P12996 Confidence 26.39% Date Thu Jan 5 11:33:15 GMT 2012 Rank 486 Aligned Residues 173 % Identity 10% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		136	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure													.	.											.																												.	.	.	.	.	.	.	.	.
Query SS confidence													.	.											.																												.	.	.	.	.	.	.	.	.
Query Sequence		E	S	Q	A	Q	R	L	A	N	A	G	.	.	L	D	Y	Y	N	H	N	L	D	T	.	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	.	.	.	.	.	.	.	.	.	G	I	K	V	C	S	G	G	I	V	G	L	G	E	T	V	K	D	R	A
Query Conservation													.	.											.																												.	.	.	.	.	.	.	.	.
Alig confidence													.	.											.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K
Template Known Secondary structure												G	G	G		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S										S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	.	.	.	.	.	.	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F
Query Conservation																																						.	.	.	.	.	.
Alig confidence														.																								.	.	.	.	.	.																																				.
Template Conservation														.																																																																	.
Template Sequence		E	I	A	D	V	L	L	E	T	N	I	D	.	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	.	K	I
Template Known Secondary structure										T	T		S	.								B	S						G	G	G	T	T			S																						T	T	T		S						S	S			S							.
Template Predicted Secondary structure														.																																																																	.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.						.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	.	.	.	.	.	D	K	D	L	Q	L	F	R	K	L	G	L	N
Query Conservation																							.	.	.	.	.
Alig confidence												.											.	.	.	.	.
Template Conservation												.
Template Sequence		E	A	G	A	S	V	C	Q	L	Y	.	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q	R	G	Y	Y
Template Known Secondary structure			T	T							S	.							G	G	G																	T		S
Template Predicted Secondary structure												.
Template SS confidence
		519	520	.	.	.	.	.	.	.	.		.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions