Job Description P12996 Confidence 96.60% Date Thu Jan 5 11:33:15 GMT 2012 Rank 51 Aligned Residues 213 % Identity 14% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.											.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	.	.	.	.	.	.	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	M	G	L	E	A	C	M	T	L	G	T	L	S	.	.	.	.	.	.	.	.	.	.	E	S	Q	A
Query Conservation																															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	M	E	D	M	V	G	A	C	A	D	I	D	A	A	G	Y	W	S	V	E	C	W	G	G	A	T	Y	D	S	C	I	R	F	L	N	E	D	P	W	E	R	L	R	T	F	R	K	L	M	P	N	S	R	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	N	D	E	V	V	D	R	F	V
Template Known Secondary structure				G	G	G	T	G	G	G						T	S			S							T	T								T	S																T	T	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		Q	R	L	A	N	A	G	L	D	Y	Y	N	H	N	L	D	T	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	.	.	V	G	L	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E
Query Conservation																																																							.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																													.	.																							.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Template Sequence		D	K	S	A	E	N	G	M	D	V	F	R	V	F	.	.	.	.	.	.	.	.	.	.	.	D	A	M	N	D	P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V	H	T	V	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	.	.	D
Template Known Secondary structure							T	T								.	.	.	.	.	.	.	.	.	.	.		T	T			T													T	T													T	T																T	T		.	.	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.												.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																								.													.																.	.	.
Query SS confidence																																								.													.																.	.	.
Query Sequence		S	V	P	I	N	M	L	V	K	V	K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	.	T	S	Y	V	R	L	S	A	G	R	E	Q	.	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	.	.	.	S	I	F	Y	G	C	K	L	L	T
Query Conservation																																								.													.																.	.	.
Alig confidence					.	.	.	.	.	.					.	.	.	.																						.													.																.	.	.						.
Template Conservation					.	.	.	.	.	.					.	.	.	.																																																											.
Template Sequence		S	I	A	.	.	.	.	.	.	L	K	D	M	.	.	.	.	A	A	L	L	K	P	Q	P	A	Y	D	I	I	K	A	I	K	D	T	Y	G	Q	K	T	Q	I	N	L	H	C	H	S	T	T	G	V	T	E	V	S	L	M	K	A	I	E	A	G	V	D	V	V	D	T	A	I	S	S	.	M	S	L	G
Template Known Secondary structure					.	.	.	.	.	.				T	.	.	.	.	T																					T	T								B		T	T	S												T	T		S					B		G	G	.	G		S	T
Template Predicted Secondary structure					.	.	.	.	.	.					.	.	.	.																																																											.
Template SS confidence
		180	.	.							.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	N	P	E	E	D	K	D	L	Q	L	F	R	K	L	G	L	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	H	N	P	T	E	S	V	A	E	M	L	E	G	T	G	Y	T	T
Template Known Secondary structure		T	S	B		B							T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions