Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence68.15%DateThu Jan 5 11:33:15 GMT 2012
Rank224Aligned Residues60
% Identity20%Templatec1mwoA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha amylase; PDBTitle: crystal structure analysis of the hyperthermostable2 pyrocoocus woesei alpha-amylase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150...... ...160.. ...... .170.........180.........190....
Predicted Secondary structure 







.
...................



.




Query SS confidence 




















.





. . . . . . . . . . . . . . . . . . .





.

























Query Sequence  ESQAQRLANAGLDYYNHNLDT. SPEFYG. . . . . . . . . . . . . . . . . . . NIITTR. TYQERLDTLEKVRDAGIKVCSGGIVG
Query Conservation   
 
  

 

        

.
     ................... 
    .    

  
  
   

 
  
 
 
Alig confidence 




















.





...................





.

























Template Conservation    




  


 



 
           

   

           

   

  


 

  

 







 
 
Template Sequence  RSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVIN
Template Known Secondary structure  T




STTGGG

SSSTT
SS
S
BTTBSS
SS

TT


S
Template Predicted Secondary structure 















































Template SS confidence 















































































   31........40.........50.........60.........70.........80.........90.........100.........110
 
   195
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  H
Template Known Secondary structure  B
Template Predicted Secondary structure 
Template SS confidence 
   111
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions