Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence47.50%DateThu Jan 5 11:33:15 GMT 2012
Rank343Aligned Residues105
% Identity14%Templatec1jpmB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140...... ...150....
Predicted Secondary structure 
























.



Query SS confidence 






































































.







Query Sequence  MEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAG. LDYYNHNL
Query Conservation   
 


   
      
   
 




        
 
 
 
  
      
  
 
 
  
 
  

 

.        
Alig confidence 






















...

















...























.







Template Conservation       
      
      
  
...


    
      
   ...  



 

           
     
    
 
Template Sequence  WRPKEAVTAIRKMEDAGLGIELV. . . EQPVHKDDLAGLKKVTDA. . . TDTPIMADESVFTPRQAFEVLQTRSADLINIKL
Template Known Secondary structure  S
TT

...

S
TT
...
SS
STT
SST

S
Template Predicted Secondary structure 





...






...















Template SS confidence 















































































   196...200.........210........ .220.........230...... ...240.........250.........260.........
 
   155....160.........170.........180.........190......
Predicted Secondary structure 













Query SS confidence 









































Query Sequence  DTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLG
Query Conservation 


      
        

  
  
   

 
  
 
 


Alig confidence  ..........































Template Conservation  ..........   


         
   

         
 
Template Sequence  . . . . . . . . . . MKAGGISGAEKINAMAEACGVECMVGSMIETK
Template Known Secondary structure  ..........TSTT



SS

Template Predicted Secondary structure  ..........














Template SS confidence 









































   270.........280.........290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions