Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence67.89%DateThu Jan 5 11:33:15 GMT 2012
Rank226Aligned Residues71
% Identity14%Templatec1jibA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:neopullulanase; PDBTitle: complex of alpha-amylase ii (tva ii) from thermoactinomyces2 vulgaris r-47 with maltotetraose based on a crystal soaked3 with maltohexaose.
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150... ... . ..160........ .170.........180.........190..... ....200......
Predicted Secondary structure 




..


.
.....



.





.


Query SS confidence 
















. .


.
. . . . .










.


























.










Query Sequence  SQAQRLANAGLDYYNHN. . LDT. S. . . . . PEFYGNIITTR. TYQERLDTLEKVRDAGIKVCSGGIVGL. GETVKDRAGLL
Query Conservation 
 
  

 

       .. 

.
.....      
    .    

  
  
   

 
  
 
 

.


 

    
Alig confidence 
















..


.
.....










.


























.










Template Conservation   





 


  
 
 

       

   

  

   

  


 

   
  

 



 
 

       
    
Template Sequence  DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVL
Template Known Secondary structure  TT
S



SSSS

S
S
TTT

TTT


SB

TTS
Template Predicted Secondary structure 





































Template SS confidence 















































































   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   207
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  Q
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   257
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions