Return to main results Retrieve Phyre Job Id

Job DescriptionP12996
Confidence75.28%DateThu Jan 5 11:33:15 GMT 2012
Rank183Aligned Residues59
% Identity17%Templatec1bagA_
PDB info PDB header:alpha-amylaseChain: A: PDB Molecule:alpha-1,4-glucan-4-glucanohydrolase; PDBTitle: alpha-amylase from bacillus subtilis complexed with2 maltopentaose
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150... ... ...160 ........ .170.........180.........190.....
Predicted Secondary structure 




..


.
................



.





Query SS confidence 
















. .


.



. . . . . . . . . . . . . . . .







.


























Query Sequence  SQAQRLANAGLDYYNHN. . LDT. SPEF. . . . . . . . . . . . . . . . YGNIITTR. TYQERLDTLEKVRDAGIKVCSGGIVGL
Query Conservation 
 
  

 

       .. 

.
   ................   
    .    

  
  
   

 
  
 
 

Alig confidence 
















..


.



................







.


























Template Conservation   




  


  
 
 

 
              
 

   

  

   

  


 

  

  

 



 
 

Template Sequence  HNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINH
Template Known Secondary structure  TTT
S
S



TGGG


GGGGGGGG
TTTTTT


SB
Template Predicted Secondary structure 














































Template SS confidence 














































































   24.....30.........40.........50.........60.........70.........80.........90.........100..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions