Job Description P0AFF2 Confidence 4.21% Date Thu Jan 5 11:26:05 GMT 2012 Rank 34 Aligned Residues 358 % Identity 9% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		S	S	D	R	K	K	I	R	I	R	Y	V	I	Q	L	L	V	I	E	V	L	L	A	W	F	F	L	N	S	D	V	G	L	G	F	V	K	G	F	.	.	.	.	.	.	S	E	M	F	E	K	L	L	G	F	A	N	E	G	T	N	F	V	F	G	S	M	N	D	Q	G	L	A	F	F	F	L	K	V	L
Query Conservation																																									.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.																														.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		D	P	T	Y	R	R	L	R	W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	V	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P	R	.	.	.	V	F	L
Template Known Secondary structure																												T	S								T	T	S	S	T	T		S	S																											S				.	.	.
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		C	P	I	V	F	I	S	A	L	I	G	I	L	Q	.	.	.	.	.	.	H	I	R	V	L	P	V	I	I	R	A	I	G	F	L	L	S	K	V	N	G	M	G	K	L	E	S	F	N	A	V	S	S	L	I	L	G	Q	S	E	N	F	I	A	Y	K	D	I	L	G	K	I	S	R	N	R	M	Y	T	M
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	G	L	I	L	A	A	A	V	M	L	F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V
Template Known Secondary structure																							S	S	S	S																T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T		T	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.	.																					.	.	.
Query SS confidence		.	.																					.	.	.
Query Sequence		.	.	A	A	T	A	M	S	T	V	S	M	S	I	V	G	A	Y	M	T	M	L	.	.	.	E	P	K	Y	V	V	A	A	L	V	L	N	M	F	S	T	F	I	V	L	S	L	I	N	P	Y	R	V	D	A	S	E	E	N	I	Q	M	S	N	L	H	E	G	Q	S	F	F	E	M	L	G	E	Y	I	L
Query Conservation		.	.																					.	.	.
Alig confidence		.	.																					.	.	.
Template Conservation
Template Sequence		W	N	C	A	H	N	V	G	G	G	I	P	P	L	L	F	L	L	G	M	A	W	F	N	D	W	H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K
Template Known Secondary structure											T	S												T			S	T	T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	F	K	V	A	I	I	V	A	A	M	L	I	G	F	I	A	L	I	A	A	L	N	A	L	F	A	T	V	T	G	W	F	G	Y	S	I	S	F	Q	G	I	L	G	Y	I	F	Y	P	I	A	W	V	M	G	V	P	S	S	E	A	L	Q	V	G	S	I	M	A	T	K	L	V	S	N	E	F	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y	L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T
Template Known Secondary structure																												B	T	T	B	S																																T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	D	L	Q	K	I	A	S	T	L	S	P	R	A	E	G	I	I	S	V	F	L	V	S	F	A	N	F	S	S	I	G	I	I	A	G	A	V	K	G	L	N	E	E	Q	G	N	V	V	S	R	F	G	L	K	L	V	Y	G	S	T	L	V	S	V	L	S	A	S	I	A	A	L	V
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T	V	D	M	I	C	M	I	V	I	G	F	L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	.	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T
Template Known Secondary structure							T	T	S			T	T																	T													T	S		T	T				.
Template Predicted Secondary structure																																																			.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions