Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFF2
Confidence5.90%DateThu Jan 5 11:26:05 GMT 2012
Rank27Aligned Residues23
% Identity4%Templated1bl0a2
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   348.350.........360.........370
Predicted Secondary structure 



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Query Sequence  VSFANFSSIGIIAGAVKGLNEEQ
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Template Conservation   

     
 
 

   
 

  
Template Sequence  YGFESQQTLTRTFKNYFDVPPHK
Template Known Secondary structure  TT
S
SS
Template Predicted Secondary structure 





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   86...90.........100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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