Job Description P0AFF2 Confidence 4.19% Date Thu Jan 5 11:26:05 GMT 2012 Rank 35 Aligned Residues 26 % Identity 38% Template c2jy0A_ PDB info PDB header:membrane protein, viral protein Chain: A: PDB Molecule:protease ns2-3; PDBTitle: solution nmr structure of hcv ns2 protein, membrane segment2 (1-27) Resolution UNK

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Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		M	D	R	V	L	H	F	V	L	A	L	A	V	V	A	I	L	A	L	L	.	V	S	S	D	R	K
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		M	D	R	E	M	A	A	S	A	G	G	A	V	F	V	G	L	V	L	L	T	L	S	P	H	Y	K
Template Known Secondary structure									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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