 |
Job Description | P45759 | Confidence | 96.35% | Date | Wed Jan 25 15:20:55 GMT 2012 |
Rank | 223 | Aligned Residues | 89 |
% Identity | 19% | Template | d1tq4a_ |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| G proteins
|
Resolution | 1.95 |
|
 |
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 300 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | K | Q | D | L | E | N | L | I | Q | L | P | H | G | I | I | L | V | T | G | P | T | G | S | G | K | S | T | T | L | Y | A | I | L | S | . |
A | L | N | T | P | G | R | N | I | L | T | V | E | D | P | V | E | Y | E | L | E | G | I | G | Q | T | Q | V | . |
. |
. |
. |
. |
N | T | R | V | D | M | S | F | A | R |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   | . |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|   |   |
| . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | A | I | S | D | A | L | K | E | I | D | S | S | V | L | N | V | A | V | T | G | E | T | G | S | G | K | S | S | F | I | N | T | L | R | G | I | G | N | E | E | E | G | A | A | K | T | G | V | M | E | R | H | P | Y | K | H | P | N | I | P | N | V | V | F | W | D | L | P | G | I | G | S | T | N | F | P | P | D | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  | T |
|
| T | T | S | T | T | S |
|
|
|
|
|
|
|
|  |  |  |  |
| S | S |
| T | T |  |  |  |  |  |
|
|
| G | G | G | S | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
  |   |
303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | R | A | I | L | R | Q | D | P | D | V | V | M | V |
Query Conservation |   |
  |
|
|   |   |
|
|   |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
Y | L | E | K | M | K | F | Y | E | Y | D | F | F | I | I |
Template Known Secondary structure |   |
 |  |  |  | T | T | G | G | G |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|